Query= MSMg01no184_j23.b1 MSMg01no184_j23.b1 CHROMAT_FILE:
MSMg01no184_j23.b1 PHD_FILE: MSMg01no184_j23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:59:04 2005
(315 letters)
>mm_chr6_100931006_100931719
Length = 714
Score = 555 bits (287), Expect = e-162
Identities = 305/311 (98%), Gaps = 1/311 (0%)
Strand = Plus / Minus
Query: 5 gaattctctttgcataaggaagccaattgtatcagggttcgggccctaaagagcatcact 64
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 514 gaattctctttgcataaggaagccaattgtatcagggttcaggccctaaagagcatcact 455
Query: 65 gcgtctgctaatatggtcataatgtgaagcagtagagttagaatcacactttatgacctt 124
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 gtgtctgctaatatggtcataatgtgaagcagtagagttagaatcacactttatgacctt 395
Query: 125 tgcagagacattgagcagatgaatgacatggcctgcctgagttcacacgtcagcgtgact 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tgcagagacattgagcagatgaatgacatggcctgcctgagttcacacgtcagcgtgact 335
Query: 185 ctttacccttaagctttgtttagcttaactcaaattccccttcccataggtagctgatgg 244
|||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 334 ctttactcttaagctttgtttagctttactcaaattccccttcccataggtagctgatgg 275
Query: 245 gatcgccagctattcccatgcaaactcatgcacagtcttctttttttcaaattttattag 304
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 gatcaccagctattcccatgcaaactcatgcacagtcttctttttttcaaattttattag 215
Query: 305 atactttcttc 315
|||| ||||||
Sbjct: 214 atac-ttcttc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 714
Length adjustment: 9
Effective length of query: 306
Effective length of database: 705
Effective search space: 215730
Effective search space used: 215730
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no184_j23.g1 MSMg01no184_j23.g1 CHROMAT_FILE:
MSMg01no184_j23.g1 PHD_FILE: MSMg01no184_j23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:59:04 2005
(234 letters)
>mm_chr6_100823321_100823954
Length = 634
Score = 426 bits (220), Expect = e-124
Identities = 232/236 (98%), Gaps = 4/236 (1%)
Strand = Plus / Plus
Query: 1 ctcaggacgactgcctaggtgactctaatagagcacttaggtagatgatagagccatctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctcaggacgactgcctaggtgactctaatagagcacttaggtagatgatagagccatctt 260
Query: 61 ttctttagacattcatggagggaaaaggaaaactttccattttagtggttgggaaagaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttctttagacattcatggagggaaaaggaaaactttccattttagtggttgggaaagaga 320
Query: 121 tccaaagaaaagcaggacttttgtgacacgcggggaatcggtacttaaaggtcagccgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tccaaagaaaagcaggacttttgtgacacgcggggaatcggtacttaaaggtcagccgct 380
Query: 181 acagtaaagtggttttaaaaacaattttcttta-tatttattttt-actttatgtg 234
||||||||||||||||||||||| |||| |||| ||||||||||| ||||||||||
Sbjct: 381 acagtaaagtggttttaaaaaca-tttt-tttaatatttattttttactttatgtg 434
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space: 140625
Effective search space used: 140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
