Query= MSMg01no184_l11.b1 MSMg01no184_l11.b1 CHROMAT_FILE:
MSMg01no184_l11.b1 PHD_FILE: MSMg01no184_l11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:59:12 2005
(303 letters)
>mm_chr6_93938041_93938741
Length = 701
Score = 524 bits (271), Expect = e-153
Identities = 292/299 (97%), Gaps = 2/299 (0%)
Strand = Plus / Minus
Query: 5 gaattctctggagtagtcgctactccttcacttaagtgacttgtgcatccacagatttgg 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaattctctggagtagtggctactccttcacttaagtgacttgtgcatccacagatttgg 442
Query: 65 agcattgaaggttcttgggggtagggaggcagggagtctctcacaaattcataggaataa 124
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 441 agcattgaaggttctt-ggggtagggaggcagggagtctctcacaaattcataggaaaaa 383
Query: 125 cttaatgtttgttagaagaaataagatttcagaatctgttaagtcggagctgaaaagtcc 184
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 ctt-atgtttgttagaagaaataagatttcagaatctgttaagtcggagctgaaaagtcc 324
Query: 185 ctgctccagtttcttagcctggcctaggcactatcagtaatttgatagacaacattttgt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ctgctccagtttcttagcctggcctaggcactatcagtaatttgatagacaacattttgt 264
Query: 245 ggcttttactttaaatacagacatgtattttgcatgccatggcttttataaaaatgtta 303
|| |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||
Sbjct: 263 ggtttttactttaaatatagacatgtattttgcatgctatggcttttataaaaatgtta 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 303
Length of database: 701
Length adjustment: 9
Effective length of query: 294
Effective length of database: 692
Effective search space: 203448
Effective search space used: 203448
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no184_l11.g1 MSMg01no184_l11.g1 CHROMAT_FILE:
MSMg01no184_l11.g1 PHD_FILE: MSMg01no184_l11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:59:12 2005
(608 letters)
>mm_chr6_93783206_93784213
Length = 1008
Score = 774 bits (400), Expect = 0.0
Identities = 409/412 (99%)
Strand = Plus / Plus
Query: 1 tgggtggcagaaacccagatacaaaaggagccagtttcatgggcacactaatcacaattg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgggtggcagaaacccagatacaaaaggagccagtttcatgggcacactaatcacaattg 260
Query: 61 tatagccattttaaacacagcaactgttaattaaaatgttgtgtgaaggggccaggcata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tatagccattttaaacacagcaactgttaattaaaatgttgtgtgaaggggccaggcata 320
Query: 121 taggcacatgattttaatcccagcaactgggaggcagaggccagcctaatatacataata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taggcacatgattttaatcccagcaactgggaggcagaggccagcctaatatacataata 380
Query: 181 agttcctagttattcaagatttgagatccatctttaaaaaataaaataaaataaaataag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agttcctagttattcaagatttgagatccatctttaaaaaataaaataaaataaaataag 440
Query: 241 atccatgaagggttggcaagaaggcactagccccacaggcctggtgacatgaatttggcc 300
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 441 atctatgaagggttggcaagaaggcactagccccacaggcctggtgacatgaatttggtc 500
Query: 301 cccagaattcaggaaaaaaaggaaccaattgcacagctgccctctgacctccacacacac 360
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 501 cccagaattcaggaaaaaaaggaaccaattgcacagctgtcctctgacctccacacacac 560
Query: 361 tccgtggcatgcctccatgacaataaataaaacatttagggtgctgggtgat 412
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tccgtggcatgcctccatgacaataaataaaacatttagggtgctgggtgat 612
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 608
Length of database: 1008
Length adjustment: 10
Effective length of query: 598
Effective length of database: 998
Effective search space: 596804
Effective search space used: 596804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
