Query= MSMg01no185_c11.b1 MSMg01no185_c11.b1 CHROMAT_FILE:
MSMg01no185_c11.b1 PHD_FILE: MSMg01no185_c11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:59:47 2005
(318 letters)
>mm_chr6_45938442_45939159
Length = 718
Score = 592 bits (306), Expect = e-173
Identities = 312/314 (99%)
Strand = Plus / Minus
Query: 5 gaattctccaaacagggcctggaacaaaatagtgatttgtgcaaatgtgttcctgcctaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 gaattctccaaacagggcctggaacaaaatagtgatttgtgcaaatgtgttcctgcctaa 459
Query: 65 cacttagcacaatggggcagtgtgacagagagaatgggtgtggtttattgcctctagaca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 458 cacttagcacaatggggcagtgtgacagagagaatgggtgtggtttattgcctttagaca 399
Query: 125 gtcctatagaattgataaaaatcatgaagaaaagttttttcccattgtcaaccctcattt 184
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 398 gtcctatagaattgataaaaatcatgaagaaaagttttttcccattgtccaccctcattt 339
Query: 185 tactcatgataaattccttagtggtgggctgaaaacataaaatgacctataagccagacc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 tactcatgataaattccttagtggtgggctgaaaacataaaatgacctataagccagacc 279
Query: 245 tccattacaaagtcaaatctgttcctctatgcatagcttacaattttttgaaatatccac 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 tccattacaaagtcaaatctgttcctctatgcatagcttacaattttttgaaatatccac 219
Query: 305 acattctcttgtgg 318
||||||||||||||
Sbjct: 218 acattctcttgtgg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space: 219081
Effective search space used: 219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no185_c11.g1 MSMg01no185_c11.g1 CHROMAT_FILE:
MSMg01no185_c11.g1 PHD_FILE: MSMg01no185_c11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:59:47 2005
(284 letters)
>mm_chr6_45796999_45797682
Length = 684
Score = 453 bits (234), Expect = e-132
Identities = 270/282 (95%), Gaps = 2/282 (0%)
Strand = Plus / Plus
Query: 1 tttaatgatctaagttgtaacacagtgaagcagacagctaagcactgaaggatcaagttg 60
|||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 201 tttaatgatctaagttgtaacacagtgaagcagacagcaaagcaaggaaggatcaagttg 260
Query: 61 ggggaaaggcaccataggaggaaaagtaggttctctgtaggaacttattcagaaatgagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggggaaaggcaccataggaggaaaagtaggttctctgtaggaacttattcagaaatgagg 320
Query: 121 tatggtggaggaggaaactttttggaaa-acgttctgaatgggctgagccctcataagag 179
|||||||||| |||||| |||||||||| | |||||||||||||||||||||||||||||
Sbjct: 321 tatggtggagaaggaaagtttttggaaaga-gttctgaatgggctgagccctcataagag 379
Query: 180 aagaggaaagactacagtgtcttagggtatacactggaatttcacctacagatgagcaaa 239
|||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 380 aagaggaaggactacggtgtcttagggtatacactggaatgtcacctacagatgagcaaa 439
Query: 240 agggttcagtttgaattcagacagatgaatttcacctacctt 281
|||||||||||||||||||||||||||| | |||||||||||
Sbjct: 440 agggttcagtttgaattcagacagatgactgtcacctacctt 481
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 684
Length adjustment: 9
Effective length of query: 275
Effective length of database: 675
Effective search space: 185625
Effective search space used: 185625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
