NCCTTTTTTCTTNNCCATTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXCGCGGAATTCACTAGAGACCTGGGAGGGACCTTGAA
TGACATGCCCAACAATAGTAGGGAGAGTGAATTTACAGAGCTGACCTCCA
TCAATAAGACAGGGCATTAAGTGAGGGATGAGGTTAGGGTTGCCATTCCA
CAATCACACCTCTACCCATAATTGTTCCTGTCTCAAAGAATTACAGGGAT
GAAAATGGAGAGGAGCCTGGGGAAAAGAAGGTCCAGCAGCAGGCCCAAAA
TGGGATCCAGCTCAAGGGAAGGTCCCAAGGCCTGACAATATTATTGAAGC
TATGGAGCACTCACAAAAACGAACCTATCATGACTGCCCTCCGAAAGACC
CAAAAGCAACTGAAAGAGTAAAATGCAGATATTTGCACCCAAGCAATGTA
CAGAAGCAGCTGACCCCTGTGGTTGAATTATGGAAGGCTGATAGAAGCTG
ACGACAAGGGCGACCCTGCATGAACACCATCTGTCTGAGCTAATTTGTAT
TTTCTTAGATTTGTCAATCATTTGCTTTTCCTTTCCTATCGTCTTATTCT
CGATTGACGTGTCCTTTTTAACTTTTTTCCTTTTCCTAGTTCTACCTTTG
TCCCTTGCGCTTTATTTTATCTCCAGCACGTCATTTCATCCCCCCTTTTA
AACTTTGACCCTCTTCTCCACGTTATTACCCATATCCTCGTTACCTCCCA
CATATCCCTTTTTCCCCCTTTTTTTTTCCTTTTG

CTTCTACTTCNCCACCTATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATTGCACAT
CTACCAGCATGTAAGTGAGCCTCTGATGCGCAGAGAAACTGGGTGTGTAA
CACAAGCAGAACCTCTGCCAGCCAAAGGAAACAACAGGACTAAGAGGTTA
GTCTTCCTTGGAACCTCAGAGTTTTCCAGATACTTTCTTCAGTTTGTAAA
CTTATAATGGTCTTTTGAATCTGTCAGTAGCTTATCAAACACATCAGTCT
TTCAGTTTGCCATTTGTATGGCTTTATGTTCAGCAAAACCCTGCTGATTC
CATAAAAATTGTAGGCAATGACTTAGTTCTCTTTAATTTCGTCTAGTGTT
TGCTTTTATATTCTGTGTTTTAATATGTTTCAGCTGCAAAAGGCAACCAA
AAGTTCTGCTTTTATCCTGTAATATTAACAAGCAAATAAAAAATGATATT
TTAAAAAATGGAATCATATTTCTGTGTCTACTGAAGATAGAGTAAATTTG
TAAGTCTATGTTTAATAAGCTAGTAGACTCATAGTCTGGGATTTGGGAAA
ATAGTAATGATATATGTGAAGATGCTCAGCCATGTGTGCATCCTTGACTG
AGAGACTATAACCACACTAATGTATTAAAAATCATTGCTTATCAGCTTTA
GAAATAGTATCTCAGTATACAAAATCATATGCAAAACAATAAAATTAAG

Query= MSMg01no185_f03.g1 MSMg01no185_f03.g1 CHROMAT_FILE:
MSMg01no185_f03.g1 PHD_FILE: MSMg01no185_f03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:59:59 2005
         (559 letters)



>mm_chr6_61568756_61569713
          Length = 958

 Score = 1004 bits (519), Expect = 0.0
 Identities = 549/559 (98%), Gaps = 1/559 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   attgcacatctaccagcatgtaagtgagcctctgatgcgcagagaaactgggtgtgtaac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attgcacatctaccagcatgtaagtgagcctctgatgcgcagagaaactgggtgtgtaac 260

                                                                       
Query: 61  acaagcagaacctctgccagccaaaggaaacaacaggactaagaggttagtcttccttgg 120
           |||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acaagtggagcctctgccagccaaaggaaacaacaggactaagaggttagtcttccttgg 320

                                                                       
Query: 121 aacctcagagttttccagatactttcttcagtttgtaaacttataatggtcttttgaatc 180
           |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||
Sbjct: 321 aacctcagagttttccagatgctttcttcagtttgtaaacttataatggtctttcgaatc 380

                                                                       
Query: 181 tgtcagtagcttatcaaacacatcagtctttcagtttgccatttgtatggctttatgttc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtcagtagcttatcaaacacatcagtctttcagtttgccatttgtatggctttatgttc 440

                                                                       
Query: 241 agcaaaaccctgctgattccataaaaattgtaggcaatgacttagttctctttaatttcg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agcaaaaccctgctgattccataaaaattgtaggcaatgacttagttctctttaatttcg 500

                                                                       
Query: 301 tctagtgtttgcttttatattctgtgttttaatatgtttcagctgcaaaaggcaaccaaa 360
           ||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 501 tctagtgtttgctcttatattctgtgttttaatatgtttcagttgcaaaaggcaaccaaa 560

                                                                       
Query: 361 agttctgcttttatcctgtaatattaacaagcaaataaaaaatgatattttaaaaaatgg 420
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 561 agttctgcttttatcctgtaatattaacaagcaaataaaaa-tgatattttaaaaaatgg 619

                                                                       
Query: 421 aatcatatttctgtgtctactgaagatagagtaaatttgtaagtctatgtttaataagct 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 aatcatatttctgtgtctactgaagatagagtaaatttgtaagtctatgtttaataagct 679

                                                                       
Query: 481 agtagactcatagtctgggatttgggaaaatagtaatgatatatgtgaagatgctcagcc 540
           |||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 agtaaacgcatagtctgggatttgggaaaatagtaatgatatatgtgaagatgctcagcc 739

                              
Query: 541 atgtgtgcatccttgactg 559
           |||||||||||||||||||
Sbjct: 740 atgtgtgcatccttgactg 758


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 559
Length of database: 958
Length adjustment: 10
Effective length of query: 549
Effective length of database: 948
Effective search space:   520452
Effective search space used:   520452
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)