Query= MSMg01no185_l09.b1 MSMg01no185_l09.b1 CHROMAT_FILE:
MSMg01no185_l09.b1 PHD_FILE: MSMg01no185_l09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:00:29 2005
(562 letters)
>mm_chr6_8605745_8606706
Length = 962
Score = 1002 bits (518), Expect = 0.0
Identities = 548/558 (98%)
Strand = Plus / Plus
Query: 5 gaattcacctggtagggcaaaatctgagctctcctatctccaacaatgaggaacacccac 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacctggtagggcaaaatctgagctctcctatctccaacaatgaggaacacccac 264
Query: 65 caggaaatcagcaatgaccacacctaggatatgatatcaagactgtaccaagactactca 124
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 265 caggaaatcagcaatgaccacacctaggatatgatatcaagattgtaccaagactactca 324
Query: 125 ggcctgttcagaaatgttatctcctggaaagaaacagctgtctgctaggttccacttact 184
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ggcctgctcagaaatgttatctcctggaaagaaacagctgtctgctaggttccacttact 384
Query: 185 tggaggggctaaagtcacttacaatagcattttctagccatcttgaaatatattatgtac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tggaggggctaaagtcacttacaatagcattttctagccatcttgaaatatattatgtac 444
Query: 245 tgcttaagggttgacatcatcaataacggggactataggaagcatattaatacagtcttt 304
||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 445 tgcttaagggttgacatcatcaataacggggactacaggaagcaaattaatacagtcttt 504
Query: 305 tctcaagacagaaaagaaagcccaacggaaatttgcaaaaaagaacaaacaagtcgggtg 364
|||||||||||||||||||||| || |||||||||||||||||||||||||||| |||||
Sbjct: 505 tctcaagacagaaaagaaagccaaaaggaaatttgcaaaaaagaacaaacaagttgggtg 564
Query: 365 ttgtgcaccgaaacagtgtctgtgaagcaatttaaatggaaattaaaacttactcttata 424
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ttgtgcattgaaacagtgtctgtgaagcaatttaaatggaaattaaaacttactcttata 624
Query: 425 agtagatgaatctttgtgctcatcctccaaagaaattaaccttaaaataaaaagaatgtt 484
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 agcagatgaatctttgtgctcatcctccaaagaaattaaccttaaaataaaaagaatgtt 684
Query: 485 gattttacaccattctgcaaatttatgtttatgggatagctctatcttcagtgcaatatc 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gattttacaccattctgcaaatttatgtttatgggatagctctatcttcagtgcaatatc 744
Query: 545 tattgcttcactgacagc 562
||||||||||||||||||
Sbjct: 745 tattgcttcactgacagc 762
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 562
Length of database: 962
Length adjustment: 10
Effective length of query: 552
Effective length of database: 952
Effective search space: 525504
Effective search space used: 525504
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no185_l09.g1 MSMg01no185_l09.g1 CHROMAT_FILE:
MSMg01no185_l09.g1 PHD_FILE: MSMg01no185_l09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:00:29 2005
(288 letters)
>mm_chr6_8765246_8765933
Length = 688
Score = 542 bits (280), Expect = e-158
Identities = 286/288 (99%)
Strand = Plus / Minus
Query: 1 agtaactacacgtaagtggacacagaaaagcaaagcaaatgtggaatatgtgtgaaaagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 agtaactacacgtaagtggacacagaaaagcaaagcaaatgtggaatatgtgtgaaaagg 429
Query: 61 cacaaaatgtagtgcaaatagcaaggatagagtttttcctcaagggatctcaaagataac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 cacaaaatgtagtgcaaatagcaaggatagagtttttcctcaagggatctcaaagataac 369
Query: 121 aaaaagcccctcagatgaccatggaaaaccatttcgatcacactgggatgtttgcattcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 368 aaaaagcccctcagatgaccatggaaaaccatttcgatcacactgggatgtctgcattcc 309
Query: 181 acttattagtttgaagttgtagcaaatacagggataaaaggacaattacaagtttaatgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 acttattagtttgaagttgtagcaaatacagggataaaaggacaattacaagtttaatgt 249
Query: 241 attgaggaatgaattctagtgaaatcttataaacagaataagtctcat 288
||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 248 attgaggaatgaattttagtgaaatcttataaacagaataagtctcat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
