Query= MSMg01no185_p11.b1 MSMg01no185_p11.b1 CHROMAT_FILE:
MSMg01no185_p11.b1 PHD_FILE: MSMg01no185_p11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:00:48 2005
(495 letters)
>mm_chr6_49690892_49691786
Length = 895
Score = 876 bits (453), Expect = 0.0
Identities = 483/493 (97%), Gaps = 2/493 (0%)
Strand = Plus / Minus
Query: 4 ggaattcctagaccttacagagctgggttccaactctgtgcttgttggctgagttactct 63
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 ggaattcctagaccttaaagagctgggttccaactctgtgcttgttggctgagttactct 636
Query: 64 aaatcccactttgcccacacagtggtcacccacactactttgttcttccttggtgtctgt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 aaatcccactttgcccacacagtggtcacccacactactttgttcttccttggtgtctgt 576
Query: 124 ctttaacactctaaagagaacactggttactagaggtccctagactagtgtagagcaggc 183
|||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 575 ctttaacactctaaagagaacact-gtgactagaggtccctagactagtgtagagcaggc 517
Query: 184 tgtagtatcaatgggaaaga-ttttaaaccactatcttctctatgaagtccaacatccca 242
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 516 tgtagtatcaatgggaaagatttttaaaccactatcttctctatgaagtccaacatccca 457
Query: 243 ccaaggacccaggctgaatggagactatctctctccttactaacatcgggattggctgga 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 ccaaggacccaggctgaatggagactatctctctccttactaacatcgggattggctgga 397
Query: 303 tttgtttatttgccagacctttccctcccattggatttcacatatccagaaagaaaacac 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 tttgtttatttgccagacctttccctcccattggatttcacatatccagaaagaaaacac 337
Query: 363 aaactccccaccctcccacctctatgagctaacgtcatttctcctcagaattcacgtatt 422
||| || || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 aaaatcttcaatttcccacctctatgagctaacgtcatttctcctcagaattcacgtatt 277
Query: 423 gaaaccattttacgttttcagtatgaaatgtcccccacagcccatgtgttgtcctcagct 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 gaaaccattttacgttttcagtatgaaatgtcccccacagcccatgtgttgtcctcagct 217
Query: 483 gctgctggtgtta 495
|||||||||||||
Sbjct: 216 gctgctggtgtta 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 495
Length of database: 895
Length adjustment: 10
Effective length of query: 485
Effective length of database: 885
Effective search space: 429225
Effective search space used: 429225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no185_p11.g1 MSMg01no185_p11.g1 CHROMAT_FILE:
MSMg01no185_p11.g1 PHD_FILE: MSMg01no185_p11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:00:48 2005
(286 letters)
>mm_chr6_49536504_49537189
Length = 686
Score = 543 bits (281), Expect = e-159
Identities = 284/285 (99%)
Strand = Plus / Plus
Query: 1 cctctgcagttgtctacagagccattcagcccctttgcatttacagaactgtttgcgtca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctctgcagttgtctacagagccattcagcccctttgcatttacagaactgtttgcgtca 260
Query: 61 ttgggatgctttaagcggcaccatctctccaagatgggttgtaagttcctgttttgtaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgggatgctttaagcggcaccatctctccaagatgggttgtaagttcctgttttgtaag 320
Query: 121 tagtgtttctttcttcacaagacagctctaaaaaggtcagaagtctactcttttgagtgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tagtgtttctttcttcacaagacagctctaaaaaggtcagaagtctactcttttgagtgg 380
Query: 181 tactgttctgctttggttttaaatgtcatcatcttcttcagtgtttagatagtgttagct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tactgttctgctttggttttaaatgtcatcatcttcttcagtgtttagatagtgttagct 440
Query: 241 ataataaaattaatggcatagcattaactgaacacttactgtgcc 285
||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 441 ataataaaactaatggcatagcattaactgaacacttactgtgcc 485
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
