Query= MSMg01no187_d09.b1 MSMg01no187_d09.b1 CHROMAT_FILE:
MSMg01no187_d09.b1 PHD_FILE: MSMg01no187_d09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:02:27 2005
(318 letters)
>mm_chr6_36894866_36895587
Length = 722
Score = 565 bits (292), Expect = e-165
Identities = 310/318 (97%), Gaps = 4/318 (1%)
Strand = Plus / Minus
Query: 5 gaattccaagtcagagttccctctaggttttatatgaggagactccacacccccaggttt 64
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 522 gaattccaagtcagagttccctctaggttttatgtgaggagactccacacccccaggttt 463
Query: 65 ggcataccccactgaggccctttctagctaaacactgcttcctgggattatcttagtttt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 ggcataccccactgaggccctttctagctaaacactgcttcctgggattatcttagtttt 403
Query: 125 ctcgtacattacaattattaaagttgaaaattattttgatcagaaaaatttccaataatt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 ctcgtacattacaattattaaagttgaaaattattttgatcagaaaaatttccaataatt 343
Query: 185 aaatcacagtgagcta----tcgacattttgtttagaatctaaaaatcacaattggctgg 240
|||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 aaatcatagtgagctagctatcgacattttgtttagaatctaaaaatcacaattggctgg 283
Query: 241 attagtatcagaccatttattggagatcttttcttgtttttcttgactatgttttaggtt 300
||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 282 attagcatcagaccatttattggagatcttttcttgtttttcttgactatgctttaggtt 223
Query: 301 cttacagttcctagccaa 318
||||||||||||||||||
Sbjct: 222 cttacagttcctagccaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 722
Length adjustment: 9
Effective length of query: 309
Effective length of database: 713
Effective search space: 220317
Effective search space used: 220317
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no187_d09.g1 MSMg01no187_d09.g1 CHROMAT_FILE:
MSMg01no187_d09.g1 PHD_FILE: MSMg01no187_d09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:02:27 2005
(288 letters)
>mm_chr6_36759414_36760101
Length = 688
Score = 549 bits (284), Expect = e-161
Identities = 287/288 (99%)
Strand = Plus / Plus
Query: 1 gtccccatgcactctccacagcccaaaagctgctttccttcttcccatccaagcacatgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtccccatgcactctccacagcccaaaagctgctttccttcttcccatccaagcacatgc 260
Query: 61 taggttacttagctcattccccccaaaatttcctttcggctgttttgccttctggagcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taggttacttagctcattccccccaaaatttcctttcggctgttttgccttctggagcaa 320
Query: 121 gtccgtttttaaaagcagtcctatttagcggattccaggcagcctctctcctgctccaac 180
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 321 gtccgtttttaaaagcagtcctatttagcggactccaggcagcctctctcctgctccaac 380
Query: 181 cccctccacgtactgcaggctaccagaaaagtggctttggggggtaggcacactgcacca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cccctccacgtactgcaggctaccagaaaagtggctttggggggtaggcacactgcacca 440
Query: 241 gagaccctttggagaaaaccacagggtatcttgcacttactttggctt 288
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gagaccctttggagaaaaccacagggtatcttgcacttactttggctt 488
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
