Query= MSMg01no187_h20.b1 MSMg01no187_h20.b1 CHROMAT_FILE:
MSMg01no187_h20.b1 PHD_FILE: MSMg01no187_h20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:02:49 2005
(316 letters)
>mm_chr6_35354956_35355665
Length = 710
Score = 561 bits (290), Expect = e-164
Identities = 304/312 (97%), Gaps = 6/312 (1%)
Strand = Plus / Plus
Query: 5 gaattccaggcttcctgctgcagcctggaaggtgaccggcattccccacattctgtactg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccaggcttcctgctgcagcctggaaggtgaccggcattccccacattctgtactg 264
Query: 65 gcatcgcgttgcacattcgagcaggggacttgtttctcaagaaaacgttccacaggcatt 124
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gcatcgcattgcacattcgagcaggggacttgtttctcaagaaaacgttccacaggcatt 324
Query: 125 ttccctgcagggaaggcaaacaccaggatctgtgcctggaactttctgcgtggggggaat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttccctgcagggaaggcaaacaccaggatctgtgcctggaactttctgcgtggggggaat 384
Query: 185 gtgaaggggcaacagccctggcagccttgaagagctggctccctcccctggctcccactg 244
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gtgaaggggcaacagccttggcagccttgaagagctggctccctcccctggctcccactg 444
Query: 245 gggttctgcctggctctgttgatgcctggctgaggttaacaaacaccttcttctatctct 304
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 445 gggttctgcctggctctgttgatgcc------aggttaacaaacaccttcttctatctct 498
Query: 305 ttctgaaggttt 316
||||||||||||
Sbjct: 499 ttctgaaggttt 510
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 710
Length adjustment: 9
Effective length of query: 307
Effective length of database: 701
Effective search space: 215207
Effective search space used: 215207
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no187_h20.g1 MSMg01no187_h20.g1 CHROMAT_FILE:
MSMg01no187_h20.g1 PHD_FILE: MSMg01no187_h20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:02:49 2005
(476 letters)
>mm_chr6_35474397_35475272
Length = 876
Score = 785 bits (406), Expect = 0.0
Identities = 418/422 (99%)
Strand = Plus / Minus
Query: 1 aaggccagtttgagctacatgaaaccctgtctcattaattaatggacaggctagaaaaac 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 645 aaggccagtttgagctacatgaaaccctgtctcattaattaatggataggctagaaaaac 586
Query: 61 aggtgggcaaacacacagatgggttaaaccaacagcagtggtccataaaaatgatagtta 120
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 aggtgggcaaacagacagatgggttaaaccaacagcagtggtccataaaaatgatagtta 526
Query: 121 acctttattaaatgtcttgctctattaagaactatgcagcatactcatttatcatcgtag 180
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 525 acctttattaaatgtcttgctctattaagaactatgcagcatactcatttgtcatcgtag 466
Query: 181 ttgaattttaaacaggttggagggtacagacagtcttattctatcttatcactaaggaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 ttgaattttaaacaggttggagggtacagacagtcttattctatcttatcactaaggaat 406
Query: 241 ctaagatttagcaagtgagtagtctctggtcttgtaacatgaaaaagttggaacactacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 ctaagatttagcaagtgagtagtctctggtcttgtaacatgaaaaagttggaacactacc 346
Query: 301 cattctcctccagggttcttaaaatacatatctttataagcgtatattttaagtatctat 360
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 345 cattctcctccagggttcttaaaatacatatctttataagtgtatattttaagtatctat 286
Query: 361 tttaacagatgtcaccattaggtatcacatgctccattggagaacagattttatatatat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 tttaacagatgtcaccattaggtatcacatgctccattggagaacagattttatatatat 226
Query: 421 at 422
||
Sbjct: 225 at 224
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 78
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 476
Length of database: 876
Length adjustment: 10
Effective length of query: 466
Effective length of database: 866
Effective search space: 403556
Effective search space used: 403556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
