Query= MSMg01no189_o12.b1 MSMg01no189_o12.b1 CHROMAT_FILE:
MSMg01no189_o12.b1 PHD_FILE: MSMg01no189_o12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:06:00 2005
(313 letters)
>mm_chr6_31231994_31232706
Length = 713
Score = 551 bits (285), Expect = e-161
Identities = 303/309 (98%)
Strand = Plus / Plus
Query: 5 gaattcctccctaaagggggctttataaataaatttatcagtattattcaaaactggccc 64
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctccctaaagggggttttataaataaatttatcagtattattcaaaactggccc 264
Query: 65 gagttcaatatgttaacagcacacttcaaacctgtacacaaatttaatggctcatgcttt 124
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 265 gagttcaatatgttaacagcacacttcaaacctgtacacaaatctaatggctcatgcttt 324
Query: 125 ggttgaattgaagagagtagactcctatagtttcataagtagcatttgaaaataaacatt 184
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 325 ggttgaattgaagagagtagactcctatagtttcataagtagcgtttgaaaataaacatt 384
Query: 185 gaactatttctgtgagaaatgtagttcttaagccaattcagtggttctgtagctgtctag 244
|| ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 385 gagctatttctgtgagaaatgtagttcttaagccaagtcagtggttctgtagccgtctag 444
Query: 245 tttttgaccattttataaaatctagataatctttcgtgttacttggtttgagaacgagat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tttttgaccattttataaaatctagataatctttcgtgttacttggtttgagaacgagat 504
Query: 305 ggggaacca 313
|||||||||
Sbjct: 505 ggggaacca 513
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 713
Length adjustment: 9
Effective length of query: 304
Effective length of database: 704
Effective search space: 214016
Effective search space used: 214016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no189_o12.g1 MSMg01no189_o12.g1 CHROMAT_FILE:
MSMg01no189_o12.g1 PHD_FILE: MSMg01no189_o12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:06:00 2005
(285 letters)
>mm_chr6_31387551_31388236
Length = 686
Score = 532 bits (275), Expect = e-155
Identities = 281/283 (99%), Gaps = 1/283 (0%)
Strand = Plus / Minus
Query: 1 caaccctaggaatccagcaggtggactggcacaaattcaaggccagcctagagtataaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 caaccctaggaatccagcaggtggactggcacaaattcaaggccagcctagagtataaaa 592
Query: 61 cttgttacagaccagtcgaggcttcataaaaagacccacccggtctcagggaatgaagaa 120
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 cttgttacagaccagtccaggcttcataaaaagacccacccggtctcagggaatgaagaa 532
Query: 121 agaaagaaaaaaagagcaaaaagagaagaacaaagtaaggagaagaaaccataagtagta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 agaaagaaaaaaagagcaaaaagagaagaacaaagtaaggagaagaaaccataagtagta 472
Query: 181 caacataaagattcaaagggaattttttt-aaaaactatgaataattttatactgataaa 239
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 471 caacataaagattcaaagggaattttttttaaaaactatgaataattttatactgataaa 412
Query: 240 ttcaccaacttaaatgaggtgtgcatattgtacatattattca 282
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 ttcaccaacttaaatgaggtgtgcatattgtacatattattca 369
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 686
Length adjustment: 9
Effective length of query: 276
Effective length of database: 677
Effective search space: 186852
Effective search space used: 186852
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
