Query= MSMg01no190_e04.b1 MSMg01no190_e04.b1 CHROMAT_FILE:
MSMg01no190_e04.b1 PHD_FILE: MSMg01no190_e04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:06:27 2005
(315 letters)
>mm_chr6_128397851_128398563
Length = 713
Score = 495 bits (256), Expect = e-144
Identities = 283/292 (96%), Gaps = 2/292 (0%)
Strand = Plus / Minus
Query: 4 ggaattcaatactccaccctgtcagcacacccactctggagcaagtcatctacacagcat 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 ggaattcaatactccaccctgtcagcacacccactctggagcaagtcatctacacagcat 434
Query: 64 ctgtttacttgagcaagcaaccttgaacatgcctttatcctctacagcaagtacatcaag 123
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 433 ctgtttacttgagcaagcaaccttgaacatgcctttatcctctacagcaagtacgtcaag 374
Query: 124 cccttcatgagccaagtccctagatagcaggatcaaaagtagccgtcgttcccaacagtc 183
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 373 cccttcatgagccaagtccctagatagcaggatcaaaagtagccgtcgctcccaacagtc 314
Query: 184 aacaagttactggacttgctgttcctaggcagagggtcccgaggccggtttagagaaaca 243
| || ||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||
Sbjct: 313 agcaggttactggacttgctattcctgggcagagggtcccgaggccggtttagag-aaca 255
Query: 244 tatgaaagaacgaaactagcccaaggtgggtttggagaaacatatgaaagaa 295
||||||||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 254 tatgaaagaacgaaactagcccaaggtgggtttagag-aacatatgaaagaa 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 713
Length adjustment: 9
Effective length of query: 306
Effective length of database: 704
Effective search space: 215424
Effective search space used: 215424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no190_e04.g1 MSMg01no190_e04.g1 CHROMAT_FILE:
MSMg01no190_e04.g1 PHD_FILE: MSMg01no190_e04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:06:27 2005
(286 letters)
>mm_chr6_128293591_128294277
Length = 687
Score = 545 bits (282), Expect = e-160
Identities = 285/286 (99%), Gaps = 1/286 (0%)
Strand = Plus / Plus
Query: 1 tctcccacagatgtatttacaagtccgctagtactgcatgcctgtgatactagttccttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctcccacagatgtatttacaagtccgctagtactgcatgcctgtgatactagttccttg 260
Query: 61 gaggctgaggcagaagggtatgaaaagagttcaagaccttgctgcaaaaatactaaacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaggctgaggcagaagggtatgaaaagagttcaagaccttgctgcaaaaatactaaacaa 320
Query: 121 acaaatcaatgtgtttttttttt-aacatgaaaaatattggaaacgttgctgtataagct 179
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 321 acaaatcaatgtgtttttttttttaacatgaaaaatattggaaacgttgctgtataagct 380
Query: 180 acaaatctaaaactcatgccactactgccattaaagacatgaactccaggctacgcttaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acaaatctaaaactcatgccactactgccattaaagacatgaactccaggctacgcttaa 440
Query: 240 gaagggctctgagagccgggcgtggtggtgcacgcctttaatccca 285
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaagggctctgagagccgggcgtggtggtgcacgcctttaatccca 486
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 687
Length adjustment: 9
Effective length of query: 277
Effective length of database: 678
Effective search space: 187806
Effective search space used: 187806
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
