Query= MSMg01no191_a20.b1 MSMg01no191_a20.b1 CHROMAT_FILE:
MSMg01no191_a20.b1 PHD_FILE: MSMg01no191_a20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:07:31 2005
(309 letters)
>mm_chr6_38871978_38872686
Length = 709
Score = 518 bits (268), Expect = e-151
Identities = 299/318 (94%), Gaps = 14/318 (4%)
Strand = Plus / Minus
Query: 5 gaattcacggacttgaggtgacaagatccagggtccctggtgctttcttctactcagcag 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gaattcacggacttgaggtgacaagatccagggtccctggtgctttcttctactcagcag 261
Query: 65 ttagactctcagttgcagtctccctggaacacctaaagcaggccagttaggcgtatccca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ttagactctcagttgcagtctccctggaacacctaaagcaggccagttaggcgtatccca 201
Query: 125 tggaccacctatggtcaaggatatctgtgacttcagcccaacagaaaaacattaaactca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 tggaccacctatggtcaaggatatctgtgacttcagcccaacagaaaaacattaaactca 141
Query: 185 cttaaaagatgagggct--------------gtgtgtgtgtgtgtgtgtgtgtgtgtggt 230
||||||| | ||||| | |||||||||||||||||||||||||||||
Sbjct: 140 cttaaaacacgagggttttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggt 81
Query: 231 tttcttgtgtaacagaattgcatagttctcaactgtgaactttatatatgacgacatttt 290
|||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 80 tttcttttgtaacagaattgcatagttctcaactgtgaactttatagatgacgacatttt 21
Query: 291 gtgccagataccaaaagg 308
||||||||||||||||||
Sbjct: 20 gtgccagataccaaaagg 3
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 8
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 309
Length of database: 709
Length adjustment: 9
Effective length of query: 300
Effective length of database: 700
Effective search space: 210000
Effective search space used: 210000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no191_a20.g1 MSMg01no191_a20.g1 CHROMAT_FILE:
MSMg01no191_a20.g1 PHD_FILE: MSMg01no191_a20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:07:31 2005
(289 letters)
>mm_chr6_38806216_38806904
Length = 689
Score = 551 bits (285), Expect = e-161
Identities = 285/285 (100%)
Strand = Plus / Plus
Query: 1 agtttgtctcacttaaccaatgaatgatcaattagttaatctcttcctcctttcctctgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtttgtctcacttaaccaatgaatgatcaattagttaatctcttcctcctttcctctgt 260
Query: 61 tttttccgttcctccctctttccctccaataaaaacatgcctaatatgtaataatctcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttttccgttcctccctctttccctccaataaaaacatgcctaatatgtaataatctcta 320
Query: 121 aatctttggaccatatccaaaagtctatgccaaccgttcaacacaaagaatctgacctaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatctttggaccatatccaaaagtctatgccaaccgttcaacacaaagaatctgacctaa 380
Query: 181 ttaaaacatcatcttcaaaatatttatatttttaaaaagtattgtttttctgacatttaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttaaaacatcatcttcaaaatatttatatttttaaaaagtattgtttttctgacatttaa 440
Query: 241 tcatttccctttctttacaaactatatgtattttagctatgatgt 285
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcatttccctttctttacaaactatatgtattttagctatgatgt 485
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
