Query= MSMg01no191_a22.b1 MSMg01no191_a22.b1 CHROMAT_FILE:
MSMg01no191_a22.b1 PHD_FILE: MSMg01no191_a22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:07:31 2005
(314 letters)
>mm_chr6_80070744_80071457
Length = 714
Score = 600 bits (310), Expect = e-176
Identities = 310/310 (100%)
Strand = Plus / Minus
Query: 5 gaattctctagataggtcatagatcgaatattttaaggtttctgacccagttgttatgca 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 gaattctctagataggtcatagatcgaatattttaaggtttctgacccagttgttatgca 455
Query: 65 aaggcatcagggttctaggtttccaaaaccaaataccaatgttgttgaagcagtggaaaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 aaggcatcagggttctaggtttccaaaaccaaataccaatgttgttgaagcagtggaaaa 395
Query: 125 cattgtccaagacagtatttaccttagtgagtttcctatagaatcatagtaatgaaagaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 cattgtccaagacagtatttaccttagtgagtttcctatagaatcatagtaatgaaagaa 335
Query: 185 ttactaaaaagaattaaggaagtcttaggtttgcacaggtagacagctacctataatggg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 ttactaaaaagaattaaggaagtcttaggtttgcacaggtagacagctacctataatggg 275
Query: 245 aaccagaggggggaaaaaagttaacaaaactgtacagtgagctgatggccaccaagaact 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 aaccagaggggggaaaaaagttaacaaaactgtacagtgagctgatggccaccaagaact 215
Query: 305 gaggactttt 314
||||||||||
Sbjct: 214 gaggactttt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 714
Length adjustment: 9
Effective length of query: 305
Effective length of database: 705
Effective search space: 215025
Effective search space used: 215025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no191_a22.g1 MSMg01no191_a22.g1 CHROMAT_FILE:
MSMg01no191_a22.g1 PHD_FILE: MSMg01no191_a22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:07:31 2005
(288 letters)
>mm_chr6_80020033_80020722
Length = 690
Score = 536 bits (277), Expect = e-157
Identities = 286/289 (98%), Gaps = 2/289 (0%)
Strand = Plus / Plus
Query: 1 accagttaaagagaaccattatttcactagtccatgaaaaaaaaaaaaaaaa-ccttaca 59
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 accagttaaagagaaccattatttcactagtccatgaaaaaaaaaaaaaaaaaccttaca 260
Query: 60 aataaacttttccatttgtacaaaattcccctgggcattttttccccatttcaatgaagg 119
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 261 aataaacttttccatttgtacaaaattcccctgggcatcttttccccatttcaatgaagg 320
Query: 120 cttcattacttttattaaaactttcatgatgtttataacaaaatgatgttgctattgctc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttcattacttttattaaaactttcatgatgtttataacaaaatgatgttgctattgctc 380
Query: 180 tgtaagaaactaaaatatactaaaaaaa-taaaagatatatttctttacatagtaaaatc 238
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 381 tgtaagaaactaaaatatactaaaaaaaataaaagatatatttctttacatagtaaaatc 440
Query: 239 ttcaaaaaatcttatggtgataatatgactgaaaggtcaggttttatta 287
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttcaaaaaatcttatggtgataatatgactgaaaggtcaggttttatta 489
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 690
Length adjustment: 9
Effective length of query: 279
Effective length of database: 681
Effective search space: 189999
Effective search space used: 189999
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
