Query= MSMg01no191_k14.b1 MSMg01no191_k14.b1 CHROMAT_FILE:
MSMg01no191_k14.b1 PHD_FILE: MSMg01no191_k14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:08:21 2005
(314 letters)
>mm_chr6_120324607_120325320
Length = 714
Score = 503 bits (260), Expect = e-147
Identities = 293/310 (94%), Gaps = 10/310 (3%)
Strand = Plus / Plus
Query: 5 gaattcctacttttctttttccagattgttgccagcaaaggaggttttgaaatagtcacc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctacttttctttttccagattgttgccagcaaaggaggttttgaaatagtcacc 264
Query: 65 aaagagaagaaatggtctaaagtgggtagccgcttgggatatctgccaggaaaaggaact 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aaagagaagaaatggtctaaagtgggtagccgcttgggatatctgccaggaaaaggaact 324
Query: 125 gggtctcttttgaagtcacactatgaaagaattctctacccatatgagcttttccaatct 184
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 325 gggtctcttttgaagtcacactatgaaagaattctctacccatatgaacttttccaatct 384
Query: 185 ggtgtcagccttatggtgagatgcatcacagttctttttttttttttttttttttttttt 244
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ggtgtcagccttatggtgagatgcatcacagttcttttttttttttttttt--------- 435
Query: 245 tgggttttcgagacagggtttctctggatggccctggctgtcctggaactcactttggaa 304
|| |||||||||||||||||||||| |||||| | ||||||||||||||||||||| |
Sbjct: 436 -ggtttttcgagacagggtttctctgtatggccttagctgtcctggaactcactttgtag 494
Query: 305 accaggctgg 314
||||||||||
Sbjct: 495 accaggctgg 504
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 714
Length adjustment: 9
Effective length of query: 305
Effective length of database: 705
Effective search space: 215025
Effective search space used: 215025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no191_k14.g1 MSMg01no191_k14.g1 CHROMAT_FILE:
MSMg01no191_k14.g1 PHD_FILE: MSMg01no191_k14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:08:22 2005
(298 letters)
>mm_chr6_120364195_120364892
Length = 698
Score = 569 bits (294), Expect = e-166
Identities = 297/298 (99%)
Strand = Plus / Minus
Query: 1 catgttaggagacatgggaaaattcaatggcattagctaaaacaacaaaacaaaacaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 catgttaggagacatgggaaaattcaatggcattagctaaaacaacaaaacaaaacaaac 269
Query: 61 aaacaaaaaccagaaggcatttaccaaagaaacttgttattgattaaaatattatgagtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 aaacaaaaaccagaaggcatttaccaaagaaacttgttattgattaaaatattatgagtt 209
Query: 121 aggatactgtggtgatgtatgcctttaatgccagcacctgatggatctctgtgagttcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 aggatactgtggtgatgtatgcctttaatgccagcacctgatggatctctgtgagttcaa 149
Query: 181 ggcctagtctacatagaaagttccaggacgggctagagagatggctcagcatttaagagc 240
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 148 ggcctagtctacatagaaagttccaggtcgggctagagagatggctcagcatttaagagc 89
Query: 241 accgactgctcttccagaggtcctgagttcaattcccagcacccacatggttgcttac 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 accgactgctcttccagaggtcctgagttcaattcccagcacccacatggttgcttac 31
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 298
Length of database: 698
Length adjustment: 9
Effective length of query: 289
Effective length of database: 689
Effective search space: 199121
Effective search space used: 199121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
