Query= MSMg01no192_c11.b1 MSMg01no192_c11.b1 CHROMAT_FILE:
MSMg01no192_c11.b1 PHD_FILE: MSMg01no192_c11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:09:09 2005
(215 letters)
>mm_chr6_30251452_30252067
Length = 616
Score = 348 bits (180), Expect = e-100
Identities = 205/214 (95%), Gaps = 1/214 (0%)
Strand = Plus / Plus
Query: 1 aaggaaatccgaaaaaanttcactcccaaactacattaaaccagaaaataaacttgaagt 60
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaggaaatccgaaaaattttcactcccaaactacattaaaccagaaaataaacttgaagt 260
Query: 61 agagatagcctctagctttcaaatcaaaactgttatcn-cttatctcagaaatctacagt 119
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 261 agagatagcctctagctttcaaatcaaaactgttatcctcttatctcagaaatctacagt 320
Query: 120 tttaaagagccctgctttctttgtctttaagggaggtggggaaagagcagaagccaatgc 179
||||||||||||||||||||||||| |||||||||||||||||| ||||||||| |||
Sbjct: 321 tttaaagagccctgctttctttgtcagcaagggaggtggggaaagaacagaagccagtgc 380
Query: 180 atctttgcctttcttcatcttctactaaaaataa 213
||||||||||||||||||||||||||||||||||
Sbjct: 381 atctttgcctttcttcatcttctactaaaaataa 414
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 215
Length of database: 616
Length adjustment: 9
Effective length of query: 206
Effective length of database: 607
Effective search space: 125042
Effective search space used: 125042
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no192_c11.g1 MSMg01no192_c11.g1 CHROMAT_FILE:
MSMg01no192_c11.g1 PHD_FILE: MSMg01no192_c11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:09:09 2005
(181 letters)
>mm_chr6_30428733_30429311
Length = 579
Score = 304 bits (157), Expect = 3e-87
Identities = 171/179 (95%), Gaps = 8/179 (4%)
Strand = Plus / Minus
Query: 5 agacaaccagggccacactgaaagacacagtctcaatcctt---taagtcctgcctccaa 61
|||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 378 agacaaccagggccacactgaaagacacagtctcaa----taaataagtcctgcctccaa 323
Query: 62 aacaaagtgagtattctaaaatcagtctgacttcaaagagccacttgacagaatggacta 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 aacaaagtgagtattctaaaatcagtctgacttcaaagagccacttgacagaatggacta 263
Query: 122 atctggagggcaaagcagcggggtttgtgtgtgtgtggtttattcttgggggggggggg 180
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 262 atctggagggcaaagcagcggggtttgtgtgtgtgtggtttattct-gggggggggggg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 181
Length of database: 579
Length adjustment: 8
Effective length of query: 173
Effective length of database: 571
Effective search space: 98783
Effective search space used: 98783
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
