Query= MSMg01no192_n15.b1 MSMg01no192_n15.b1 CHROMAT_FILE:
MSMg01no192_n15.b1 PHD_FILE: MSMg01no192_n15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:10:48 2005
(424 letters)
>mm_chr6_68438552_68439374
Length = 823
Score = 719 bits (372), Expect = 0.0
Identities = 403/418 (96%), Gaps = 11/418 (2%)
Strand = Plus / Plus
Query: 17 gaattctgatactctaactccttggaagcctaaaaagatcctaggaatataccatgtcca 76
||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 207 gaattctgatactctaactccttggaagcctaaaaaggtcctaggaatatatcatgtcca 266
Query: 77 ctta---aaaaaaa-gtcaagatttcctaaatctatcatataatttgatctaacatgaag 132
|||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 cttaaagaaaaaaatgtcaagatttcctaaatctatcatataatttgatctaacatgaag 326
Query: 133 acatgattcttggaagcccatgtacacagagctgtatttgccattccaaataatttc--- 189
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 327 acatgattcttggaagcccatgtacacagagctgtatttgccgttccaaataatttcttt 386
Query: 190 ---ttttttcttaatctcatcaaacccttcccttaaaggggaggattctgcttgtattgc 246
|||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 387 ttttttttttttaatctcatcaaacccttcccttaaa-gggaggattctgcttgtattgc 445
Query: 247 acataaaattccaaggccctaattcacttagaactattaaaactctttatcattctgctt 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 acataaaattccaaggccctaattcacttagaactattaaaactctttatcattctgctt 505
Query: 307 tttcattgattttttttatttatttagatttcttttttattggatattttatttatttac 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 tttcattgattttttttatttatttagatttcttttttattggatattttatttatttac 565
Query: 367 atttcaaatgttatctccatttccagtttcccctctgcaaaccacctatctcattctc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 atttcaaatgttatctccatttccagtttcccctctgcaaaccacctatctcattctc 623
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 424
Length of database: 823
Length adjustment: 9
Effective length of query: 415
Effective length of database: 814
Effective search space: 337810
Effective search space used: 337810
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no192_n15.g1 MSMg01no192_n15.g1 CHROMAT_FILE:
MSMg01no192_n15.g1 PHD_FILE: MSMg01no192_n15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:10:48 2005
(372 letters)
>mm_chr6_68469857_68470626
Length = 770
Score = 605 bits (313), Expect = e-177
Identities = 353/367 (96%), Gaps = 2/367 (0%)
Strand = Plus / Minus
Query: 6 gctcccaggagcagcccagggactggtggtgtgggaatgtgggtgttcttaccagctact 65
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct: 570 gctcccaggagcagcccaaggactggtggtgtgggaatgtgggtgttcttaccagctgct 511
Query: 66 attttcaaacaggtagtgttaacatcagggatactctttttacaaaactcatttggataa 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 attttcaaacaggtagtgttaacatcagggatactctttttacaaaactcatttggataa 451
Query: 126 tacaatagaccgagcataataggcagataagaaaatgccatgcctatagtacagaacccc 185
|||||||||| ||||||||||||||||| |||||||||||||||||| |||||||| ||
Sbjct: 450 tacaatagacagagcataataggcagat--gaaaatgccatgcctatactacagaactcc 393
Query: 186 aaagatttcacattatgaaataggcaatgcttccaccaaatgttaaaagaagttggctta 245
||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct: 392 aaagatttcacattatgaaataggcaatgcttccaccaaatgttaaaagaaattgactta 333
Query: 246 tcattctgtattacatagaaagtcaaattttaacgctaatctgctttcttagttaaggtt 305
||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 332 tcattctgtattacatagaaagtcaaactttaatgctaatctgctttcttagttaaggtt 273
Query: 306 gtttctatttaattttatggataattgcggttttacttgctttatgcatggcaatatgca 365
|||||||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||
Sbjct: 272 gtttctatttaattttatggataagtgcagttttacttgctttatgcatggcaatgtgca 213
Query: 366 tgcttgt 372
|||||||
Sbjct: 212 tgcttgt 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 372
Length of database: 770
Length adjustment: 9
Effective length of query: 363
Effective length of database: 761
Effective search space: 276243
Effective search space used: 276243
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
