CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTCTTATATCCGAATATTTATTTGCAATGATATCTGGAATAAGTAC
AGTCATTATATTTTATAATAATAAAGATTAATAGCCTTACCACTAGCCAA
GAACTACTGTAGTGACAGAGAGAGACGGAGACACACACACACACACACAC
ACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXTCAACTCCTCTTTTATTTGTACGGTTATTT

CAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXACGAGGGAGTGATAAACTCAATGC
ATAAATTGGAGAGAAATTGGGAGAGTTAACCAATAACAGTTCAGCCCTTC
AGATTCACATGCACACATACACATGCACACTCCCTAAAACCTATCCTGTG
CCTGTTCACACATCAATGCACACCAAACAAGCAAACACAGAAGAGAAATA
ATATATAAAAAGAAATAAGTCAGACCTGCGGCTTCATCCCTAAGTCACAG
TTTGAGTTACATGAGTTTTCCTCATGCATTAAACAGACTAATAATATAAG
AATTCTAATGTAGGGGAAGGTGGAGAGTGATGGTTTCTCTCCCTGTCAGT
TACTTGACCCAGGGGAGCTAAATTTTTAAGAATTTATTAGCCAATTTCAT
GGATAGTTAAACTATGCATAGTATCAAATTTTATGATAGACTCATTGTAA
GTAATATAAAAATATGTTGAACATGATCACTCTAGTCTCTTTCACGTGTT
GCCATTAATAAAGGAGATAACTCTACACCAAGAAAGAAAAGCCAGCCCTC
AGTAGATTCACATGTTAATTTCATTGGGAAAGCAGCTGATGACAAGTATT
TTGGTTTACCAGCATTGCACTGTGATACTGGAAAAGATTCTAGACTTCCC
TGAGTAATCACAAGCTCCCAAAAGATTGAGTAATACN

Query= MSMg01no194_g14.g1 MSMg01no194_g14.g1 CHROMAT_FILE:
MSMg01no194_g14.g1 PHD_FILE: MSMg01no194_g14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:13:16 2005
         (551 letters)



>mm_chr6_77731811_77732765
          Length = 955

 Score = 1015 bits (525), Expect = 0.0
 Identities = 546/555 (98%), Gaps = 4/555 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   acgagggagtgataaactcaatgcataaattggagagaaattgggagagttaaccaataa 60
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 201 acgagggagtgataaactcaatgcataaaatggagagaaattgggagagttaaccaataa 260

                                                                       
Query: 61  cagttcagcccttcagattcacatgcacacatacacatgcacactccctaaaacctatcc 120
           |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 261 cagttcagcccttcagattcacatgcacacatacacgtgcacgctccctaaaacctatcc 320

                                                                       
Query: 121 tgtgcctgttcacacatcaatgcacaccaaacaagcaaacacagaagagaaat----aat 176
           ||||||||||||||||||||||||||||| |||||||||||||||||||||||    |||
Sbjct: 321 tgtgcctgttcacacatcaatgcacaccacacaagcaaacacagaagagaaataaaaaat 380

                                                                       
Query: 177 atataaaaagaaataagtcagacctgcggcttcatccctaagtcacagtttgagttacat 236
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 381 atataaaaagaaataagtcagacctgctgcttcatccctaagtcacagtttgagttacat 440

                                                                       
Query: 237 gagttttcctcatgcattaaacagactaataatataagaattctaatgtaggggaaggtg 296
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gagttttcctcatgcattaaacagactaataatataagaattctaatgtaggggaaggtg 500

                                                                       
Query: 297 gagagtgatggtttctctccctgtcagttacttgacccaggggagctaaatttttaagaa 356
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gagagtgatggtttctctccctgtcagttacttgacccaggggagctaaatttttaagaa 560

                                                                       
Query: 357 tttattagccaatttcatggatagttaaactatgcatagtatcaaattttatgatagact 416
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tttattagccaatttcatggatagttaaactatgcatagtatcaaattttatgatagact 620

                                                                       
Query: 417 cattgtaagtaatataaaaatatgttgaacatgatcactctagtctctttcacgtgttgc 476
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cattgtaagtaatataaaaatatgttgaacatgatcactctagtctctttcacgtgttgc 680

                                                                       
Query: 477 cattaataaaggagataactctacaccaagaaagaaaagccagccctcagtagattcaca 536
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cattaataaaggagataactctacaccaagaaagaaaagccagccctcagtagattcaca 740

                          
Query: 537 tgttaatttcattgg 551
           |||||||||||||||
Sbjct: 741 tgttaatttcattgg 755


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 551
Length of database: 955
Length adjustment: 10
Effective length of query: 541
Effective length of database: 945
Effective search space:   511245
Effective search space used:   511245
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)