Query= MSMg01no195_b12.b1 MSMg01no195_b12.b1 CHROMAT_FILE:
MSMg01no195_b12.b1 PHD_FILE: MSMg01no195_b12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:14:11 2005
(391 letters)
>mm_chr6_8046447_8047233
Length = 787
Score = 692 bits (358), Expect = 0.0
Identities = 382/392 (97%), Gaps = 6/392 (1%)
Strand = Plus / Minus
Query: 1 gcgagcaggtaagcaatgcttgcttcttctcccctggcactgaacatttcatttcagccc 60
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 gcgagcaggtaagcagtgattgcttcttctcccctggcactgaacatttcatttcagccc 528
Query: 61 tgtgtttaggccaggccagcaagcatcggtgttcatgtgacaattgaattccagtggggt 120
|||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 tgtgtttaggcc--g---gcaagcatcggtgttcatgtgacaattgaattccagtggggt 473
Query: 121 ttacattcagaataatgcaggaaagggcccaatagtatcatgaggctattataattttag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 ttacattcagaataatgcaggaaagggcccaatagtatcatgaggctattataattttag 413
Query: 181 aactttcagagagtaaaaaaccaaataaattacgtgtttcttggtgccatgttttttgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 aactttcagagagtaaaaaaccaaataaattacgtgtttcttggtgccatgttttttgtt 353
Query: 241 tcacccccccccc-aaccattcacctacctaactataatattattacttaagtaccagaa 299
| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 ttacccccccccccaaccattcacctacctaactataatattattacttaagtaccagaa 293
Query: 300 tcggaagtgatgacttaattcaaagacatccatcccaaatataagcccacagtgggattt 359
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 292 tcggaagtgatgacttaattcaaagacatccatcccaaatagaagcccacagtgggattt 233
Query: 360 atttgtaaaggacatgggtcctcttatggtca 391
||||||||||||||||||||||||||||||||
Sbjct: 232 atttgtaaaggacatgggtcctcttatggtca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 391
Length of database: 787
Length adjustment: 9
Effective length of query: 382
Effective length of database: 778
Effective search space: 297196
Effective search space used: 297196
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no195_b12.g1 MSMg01no195_b12.g1 CHROMAT_FILE:
MSMg01no195_b12.g1 PHD_FILE: MSMg01no195_b12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:14:11 2005
(341 letters)
>mm_chr6_7920342_7921082
Length = 741
Score = 621 bits (321), Expect = 0.0
Identities = 336/341 (98%)
Strand = Plus / Plus
Query: 1 caggcaatcaggcagaaaaagggacatcattacttgcttggtctggtccctctgattaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caggcaatcaggcagaaaaagggacatcattacttgcttggtctggtccctctgattaaa 260
Query: 61 tgtcacttttgccttaccagctaatcagtcagcaaacgaagcttcgagcacacctgattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtcacttttgccttaccagctaatcagtcagcaaacgaagcttcgagcacacctgattt 320
Query: 121 tccctttaaagaaggtcagtggctgaaaatgagatgtagagggacacatttggaagattc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tccctttaaagaaggtcagtggctgaaaatgagatgtagagggacacatttggaagattc 380
Query: 181 tcatgtgtaaaccaaaggagagattaaaagatcaggcgcctgctgagagctgctctggac 240
||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||
Sbjct: 381 tcatgtgtaaaccaaaggagagattaaaagaccaggcgcctgctaagagctgctctggac 440
Query: 241 tcagtgtttccagagcagccccaacatatggtcagttctccgttagatactgtgttataa 300
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcagtgtttccagagtagccccaacatatggtcagttctccgttagatactgtgttataa 500
Query: 301 aaggggtgggggaggaaggagagaaaaaggaggaggaagag 341
|||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 501 aaggggcgggggaggaaggagagaaagaggaggaggaagag 541
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 341
Length of database: 741
Length adjustment: 9
Effective length of query: 332
Effective length of database: 732
Effective search space: 243024
Effective search space used: 243024
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
