Query= MSMg01no201_a21.b1 MSMg01no201_a21.b1 CHROMAT_FILE:
MSMg01no201_a21.b1 PHD_FILE: MSMg01no201_a21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:20:55 2005
(429 letters)
>mm_chr6_72249663_72250488
Length = 826
Score = 652 bits (337), Expect = 0.0
Identities = 390/421 (92%), Gaps = 23/421 (5%)
Strand = Plus / Plus
Query: 16 gaattcctcctactgctcaataacaacaacatctagtttcatatgtgtggggagtctggg 75
|||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 216 gaattcctcctactgctcaataacaaca---tctagtttcatatgtgtggggagactggg 272
Query: 76 ggtgtagagcacctgccccccctgtacaaggccctggacccccagggccacaaaacgtgt 135
|||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 273 tgtgtagagcacctgcctaccatgtacaaggccctggacccccagggccacaaaacgtgt 332
Query: 136 gcagagaacttataacgacactgctcccaaagtgttatgcaaaagatcaacatgcacatt 195
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 gcagagaacttataaggacactgctcccaaagtgttatgcaaaagatcaacatgcacatt 392
Query: 196 aaattattaatctcagagaaatgcaaatcaaaatggtaaatgcatagtttgaagccgcca 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 aaattattaatctcagagaaatgcaaatcaaaatggtaaatgcatagtttgaagccgcca 452
Query: 256 gtgggatggcaactatccaaagaccaagcatacacacacagacacacacagacacacaca 315
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 453 gtgggatggcaactatccaaagaccaagcatacacacacagacacacacacacacacaca 512
Query: 316 cacaca-a-------------------taaatgatacacagtgggcggttttgtgtcata 355
|||||| | |||||||||||||||||||||||||||||||||
Sbjct: 513 cacacacacacacacacacacacacactaaatgatacacagtgggcggttttgtgtcata 572
Query: 356 gaaaagctgtatttctatagcactggtgggattgtattcaaagcaaataaggaagtttct 415
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 gaaaagctgtatttctagagcactggtgggattgtattcaaagcaaataaggaagtttct 632
Query: 416 t 416
|
Sbjct: 633 t 633
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 429
Length of database: 826
Length adjustment: 9
Effective length of query: 420
Effective length of database: 817
Effective search space: 343140
Effective search space used: 343140
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no201_a21.g1 MSMg01no201_a21.g1 CHROMAT_FILE:
MSMg01no201_a21.g1 PHD_FILE: MSMg01no201_a21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:20:55 2005
(629 letters)
>mm_chr6_72320354_72321382
Length = 1029
Score = 1122 bits (580), Expect = 0.0
Identities = 616/628 (98%), Gaps = 2/628 (0%)
Strand = Plus / Minus
Query: 1 ttcctgaatagacctgctcatggtcttagcacata-ctatctagaggcagcagccttttg 59
||||||||||||||||||||||||||||||||||| | ||||||||||||| | ||||||
Sbjct: 827 ttcctgaatagacctgctcatggtcttagcacatagc-atctagaggcagcgggcttttg 769
Query: 60 cctcaccctctttccctctgcccctctcctcctctttccctttcacctcccccagattga 119
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 768 ccgcaccctctttccctctgcccctctcctcctctttccctttcacctcccccagattga 709
Query: 120 aacttgtattcacctccccccaacccttcaaaacagattgggttccttggttaggtgaag 179
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 aacttgtattcacctccccgcaacccttcaaaacagattgggttccttggttaggtgaag 649
Query: 180 ctgtgctgcccaggttcagaagccagtctgtcacttgggtcctattaaagacgggatccc 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 648 ctgtgctgcccaggttcagaagccagtctgtcacttgggtcctattaaagacggtatccc 589
Query: 240 agctgactagaaggctgggagccaaaggccagaggatctgaggttcccaggagaggaact 299
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 agctgactagtaggctgggagccaaaggccagaggatctgaggttcccaggagaggaact 529
Query: 300 agaaggtggtcactagaaggtggagagcagcttagctcagaggcagaactggcctgactg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 agaaggtggtcactagaaggtggagagcagcttagctcagaggcagaactggcctgactg 469
Query: 360 gtcagaggtccaaagagggagagctgagctgctgagtttgtgagcacttctagagactca 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 gtcagaggtccaaagagggagagctgagctgctgagtttgtgagcacttctagagactca 409
Query: 420 gctgtgatctggtctccaatgactttcctagttctgtggatcagactgttttcctgcctg 479
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 408 gctgtgatctggtctccaatgactttcctagttctgtggagcagactgttttcctgcctg 349
Query: 480 gctccctggtcttcactacttcttgggggtcagtaggaagccataggaaaggtgaacatg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 gctccctggtcttcactacttcttgggggtcagtaggaagccataggaaaggtgaacatg 289
Query: 540 gggtagatgccatcttgaagcagatgagcaaagtgtctgttttgtgggaaggtgaggacc 599
||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 288 gggtagatgccatcttggagcagatgagcaaagtgtctgctttgtgggaaggtgaggacc 229
Query: 600 tgggaagctcccagttcggggtaacatg 627
|||||||||||||||| |||||||||||
Sbjct: 228 tgggaagctcccagtttggggtaacatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1029
Length adjustment: 10
Effective length of query: 619
Effective length of database: 1019
Effective search space: 630761
Effective search space used: 630761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
