MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-201H11
Chromosome	6 (Build37)
Map Location	120,555,149 - 120,714,335
singlet/doublet	doublet
Overlap gene	Cecr2
Upstream gene	Erc1, LOC666887, Rad52, Wnk1, EG406236, Ninj2, B4galnt3, Ccdc77, Jarid1a, Il17ra, Cecr6, Cecr5, 1700072O05Rik
Downstream gene	Slc25a18, Atp6v1e1, Bcl2l13, Bid, Mical3, LOC100043793, Minpp1-ps, Pex26, Tuba8, Usp18, Slc6a13, Slc6a12, Iqsec3, LOC100043486, A2m, EG640530
Link	Open Mouse BAC browser

Click to get alignment info.

name	Erc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:111173 MGI:2151013
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC666887 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666887
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Rad52 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19365 MGI:101949
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Wnk1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:232341 MGI:2442092
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG406236 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:406236 MGI:3644010
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ninj2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:29862 MGI:1352751
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	B4galnt3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:330406 MGI:3041155
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ccdc77 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67200 MGI:1914450
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Jarid1a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:214899 MGI:2136980
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 14 mRNAs, 248 ESTs, 8 Proteins

name	Il17ra (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16172 MGI:107399
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cecr6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:94047 MGI:2136977
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cecr5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:214932 MGI:2136976
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700072O05Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73505 MGI:1920755
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	Cecr2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:330409 MGI:1923799
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 120 ESTs, 2 Proteins

name	Slc25a18 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71803 MGI:1919053
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Atp6v1e1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11973 MGI:894326
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Bcl2l13 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:94044 MGI:2136959
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Bid (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12122 MGI:108093
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mical3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:194401 MGI:2442733
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043793 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043793
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Minpp1-ps (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17331 MGI:1336190
definition	note : multiple inositol polyphosphate histidine phosphatase 1, pseudogene pseudo : _no_value

name	Pex26 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74043 MGI:1921293
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tuba8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:53857 MGI:1858225
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Usp18 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:24110 MGI:1344364
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc6a13 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14412 MGI:95629
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc6a12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14411 MGI:95628
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Iqsec3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:243621 MGI:2677208
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043486 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043486
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	A2m (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:232345 MGI:2449119
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG640530 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:640530 MGI:3648717
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 ESTs, 6 Proteins

name	Erc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:120300970 GeneID:111173 MGI:2151013
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ELKS/RAB6-interacting/CAST family member 1 transcript_id : NM_053204.2

name	Erc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:120300941 GeneID:111173 MGI:2151013
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ELKS/RAB6-interacting/CAST family member 1 transcript_id : NM_178085.3

name	Rad52 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6755279 GeneID:19365 MGI:101949
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RAD52 homolog (S. cerevisiae) transcript_id : NM_011236.1

name	Wnk1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:38424076 GeneID:232341 MGI:2442092
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : WNK lysine deficient protein kinase 1 transcript_id : NM_198703.1

name	EG406236 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:81158088 GeneID:406236 MGI:3644010
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG406236 transcript_id : NM_001037155.1

name	Ninj2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:120407046 GeneID:29862 MGI:1352751
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ninjurin 2 transcript_id : NM_016718.2

name	B4galnt3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:38566699 GeneID:330406 MGI:3041155
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : beta-1,4-N-acetyl-galactosaminyl transferase 3 transcript_id : NM_198884.1

name	Ccdc77 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142363564 GeneID:67200 MGI:1914450
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coiled-coil domain containing 77 transcript_id : NM_026028.2

name	Jarid1a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149255408 GeneID:214899 MGI:2136980
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 14 mRNAs, 248 ESTs, 8 Proteins product : jumonji, AT rich interactive domain 1A (Rbp2 like), transcript variant 1 transcript_id : XM_359326.6

name	Il17ra (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6680410 GeneID:16172 MGI:107399
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : interleukin 17 receptor A transcript_id : NM_008359.1

name	Cecr6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:15808997 GeneID:94047 MGI:2136977
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cat eye syndrome chromosome region, candidate 6 homolog (human) transcript_id : NM_033567.1

name	Cecr5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:51093868 GeneID:214932 MGI:2136976
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cat eye syndrome chromosome region, candidate 5 homolog (human) transcript_id : NM_144815.2

name	1700072O05Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94378063 GeneID:73505 MGI:1920755
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700072O05 gene transcript_id : XM_987216.1

name	Cecr2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94378057 GeneID:330409 MGI:1923799
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 120 ESTs, 2 Proteins product : cat eye syndrome chromosome region, candidate 2 homolog (human), transcript variant 1 transcript_id : XM_204234.6

name	Slc25a18 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486669 GeneID:71803 MGI:1919053
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 25 (mitochondrial carrier), member 18 transcript_id : NM_001081048.1

name	Atp6v1e1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:45504358 GeneID:11973 MGI:894326
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : VATPase, H+ transporting, lysosomal V1 subunit E1 transcript_id : NM_007510.2

name	Bcl2l13 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:77404368 GeneID:94044 MGI:2136959
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : BCL2-like 13 (apoptosis facilitator) transcript_id : NM_153516.2

name	Bid (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:77404282 GeneID:12122 MGI:108093
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : BH3 interacting domain death agonist transcript_id : NM_007544.3

name	Mical3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:23510262 GeneID:194401 MGI:2442733
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : microtubule associated monoxygenase, calponin and LIM domain containing 3 transcript_id : NM_153396.1

name	LOC100043793 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149255410 GeneID:100043793
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100043793 transcript_id : XM_001480986.1

name	Pex26 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802833 GeneID:74043 MGI:1921293
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : peroxisome biogenesis factor 26 transcript_id : NM_028730.3

name	Tuba8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:8394492 GeneID:53857 MGI:1858225
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tubulin, alpha 8 transcript_id : NM_017379.1

name	Usp18 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6755926 GeneID:24110 MGI:1344364
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ubiquitin specific peptidase 18 transcript_id : NM_011909.1

name	Slc6a13 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130003 GeneID:14412 MGI:95629
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 6 (neurotransmitter transporter, GABA), member 13 transcript_id : NM_144512.2

name	Slc6a12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802667 GeneID:14411 MGI:95628
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12 transcript_id : NM_133661.2

name	Iqsec3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131079 GeneID:243621 MGI:2677208
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : IQ motif and Sec7 domain 3 transcript_id : NM_001033354.2

name	A2m (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31342256 GeneID:232345 MGI:2449119
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : alpha-2-macroglobulin transcript_id : NM_175628.2

name	EG640530 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149255292 GeneID:640530 MGI:3648717
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 ESTs, 6 Proteins product : predicted gene, EG640530 transcript_id : XM_001480274.1

name	Erc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:120300971 GeneID:111173 MGI:2151013
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0017137 - Rab GTPase binding [Evidence IDA] GO_process : GO:0015031 - protein transport [Evidence IEA]; GO:0042147 - retrograde transport, endosome to Golgi [Evidence IDA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; Rab6 interacting protein 2 product : Rab6-interacting protein 2 isoform 1 protein_id : NP_444434.2

name	Erc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30017397 CCDS:CCDS20476.1 GeneID:111173 MGI:2151013
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0017137 - Rab GTPase binding [Evidence IDA] GO_process : GO:0015031 - protein transport [Evidence IEA]; GO:0042147 - retrograde transport, endosome to Golgi [Evidence IDA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; Rab6 interacting protein 2 product : Rab6-interacting protein 2 isoform 2 protein_id : NP_835186.1

name	Rad52 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755280 CCDS:CCDS20477.1 GeneID:19365 MGI:101949
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0000724 - double-strand break repair via homologous recombination [Evidence IDA]; GO:0006974 - response to DNA damage stimulus [Evidence IEA] codon_start : 1 exception : mismatches in translation product : RAD52 homolog protein_id : NP_035366.1

name	Wnk1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38424077 CCDS:CCDS20478.1 GeneID:232341 MGI:2442092
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEP]; GO:0005625 - soluble fraction [Evidence IDA]; GO:0042598 - vesicular fraction [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IC] [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004672 - protein kinase activity [Evidence IDA]; GO:0004860 - protein kinase inhibitor activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA] [Evidence IC]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IDA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] [Evidence IC] [Evidence IDA]; GO:0007243 - protein kinase cascade [Evidence IC]; GO:0050794 - regulation of cellular process [Evidence IDA] codon_start : 1 exception : mismatches in translation product : protein kinase, lysine deficient 1 protein_id : NP_941992.1

name	EG406236 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:81158089 CCDS:CCDS20479.1 GeneID:406236 MGI:3644010
definition	codon_start : 1 product : hereditary sensory neuropathy, type II protein_id : NP_001032232.1

name	Ninj2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7710070 GeneID:29862 MGI:1352751
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA]; GO:0042246 - tissue regeneration [Evidence IEA] codon_start : 1 product : ninjurin 2 protein_id : NP_057927.1

name	B4galnt3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38566700 CCDS:CCDS20480.1 GeneID:330406 MGI:3041155
definition	GO_function : GO:0008376 - acetylgalactosaminyltransferase activity [Evidence ISS]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : beta 1,4-N-acetylgalactosaminyltransferase-transferase-III protein_id : NP_942585.1

name	Ccdc77 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313090 CCDS:CCDS20481.1 GeneID:67200 MGI:1914450
definition	codon_start : 1 product : coiled-coil domain containing 77 protein_id : NP_080304.1

name	Jarid1a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149255409 GeneID:214899 MGI:2136980
definition	codon_start : 1 product : jumonji, AT rich interactive domain 1A (Rbp2 like) isoform 1 protein_id : XP_359326.5

name	Il17ra (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680411 CCDS:CCDS20482.1 GeneID:16172 MGI:107399
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004907 - interleukin receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0007166 - cell surface receptor linked signal transduction [Evidence IEA] codon_start : 1 product : interleukin 17 receptor protein_id : NP_032385.1

name	Cecr6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:15808998 GeneID:94047 MGI:2136977
definition	codon_start : 1 product : cat eye syndrome chromosome region, candidate 6 homolog protein_id : NP_291045.1

name	Cecr5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21450187 CCDS:CCDS20483.1 GeneID:214932 MGI:2136976
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA] GO_process : GO:0008152 - metabolism [Evidence IEA] codon_start : 1 product : cat eye syndrome chromosome region, candidate 5 homolog precursor protein_id : NP_659064.1

name	1700072O05Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94378064 GeneID:73505 MGI:1920755
definition	codon_start : 1 product : hypothetical protein LOC73505 protein_id : XP_992310.1

name	Cecr2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83029810 GeneID:330409 MGI:1923799
definition	codon_start : 1 product : cat eye syndrome chromosome region, candidate 2 homolog isoform 1 protein_id : XP_204234.5

name	Slc25a18 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486670 GeneID:71803 MGI:1919053
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005743 - mitochondrial inner membrane [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0015293 - symporter activity [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 product : solute carrier family 25 (mitochondrial carrier), member 18 protein_id : NP_001074517.1

name	Atp6v1e1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:45504359 CCDS:CCDS20484.1 GeneID:11973 MGI:894326
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IDA]; GO:0016469 - proton-transporting two-sector ATPase complex [Evidence IEA] GO_function : GO:0015078 - hydrogen ion transporter activity [Evidence IEA]; GO:0008553 - hydrogen-exporting ATPase activity, phosphorylative mechanism [Evidence IMP]; GO:0046933 - hydrogen-transporting ATP synthase activity, rotational mechanism [Evidence IEA]; GO:0046961 - hydrogen-transporting ATPase activity, rotational mechanism [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA] GO_process : GO:0006754 - ATP biosynthesis [Evidence IEA]; GO:0015991 - ATP hydrolysis coupled proton transport [Evidence IMP]; GO:0015986 - ATP synthesis coupled proton transport [Evidence IEA]; GO:0006811 - ion transport [Evidence IEA]; GO:0015992 - proton transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : ATPase, H+ transporting lysosomal (vacuolar proton pump), 32 kDa; H(+)-ATPase E-like protein; H+ ATPase subunit E; lysosomal 31kDa; ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E; ATPase, H+ transporting, V1 subunit E product : vacuolar H+ ATPase E1 protein_id : NP_031536.2

name	Bcl2l13 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23943828 CCDS:CCDS20485.1 GeneID:94044 MGI:2136959
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA]; GO:0005739 - mitochondrion [Evidence ISS] [Evidence IEA] GO_function : GO:0008656 - caspase activator activity [Evidence ISS] GO_process : GO:0006919 - caspase activation [Evidence ISS]; GO:0006917 - induction of apoptosis [Evidence ISS] codon_start : 1 note : mitochondria located 1 homolog product : BCL2-like 13 protein_id : NP_705736.1

name	Bid (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542228 CCDS:CCDS20486.1 GeneID:12122 MGI:108093
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006915 - apoptosis [Evidence IDA]; GO:0043065 - positive regulation of apoptosis [Evidence IEA] codon_start : 1 product : BH3 interacting domain death agonist protein_id : NP_031570.2

name	Mical3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23510263 CCDS:CCDS20487.1 GeneID:194401 MGI:2442733
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0004497 - monooxygenase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006725 - aromatic compound metabolism [Evidence IEA]; GO:0006118 - electron transport [Evidence IEA]; GO:0008152 - metabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation note : flavoprotein oxidoreductase MICAL3 product : microtubule associated monoxygenase, calponin and LIM domain containing 3 protein_id : NP_700445.1

name	LOC100043793 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149255411 GeneID:100043793
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001481036.1

name	Pex26 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21311973 CCDS:CCDS20488.1 GeneID:74043 MGI:1921293
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005779 - integral to peroxisomal membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005777 - peroxisome [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0045046 - protein import into peroxisome membrane [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : peroxisome biogenesis factor 26 protein_id : NP_083006.1

name	Tuba8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:8394493 GeneID:53857 MGI:1858225
definition	GO_component : GO:0005874 - microtubule [Evidence ISS] [Evidence IEA]; GO:0043234 - protein complex [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005200 - structural constituent of cytoskeleton [Evidence ISS]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0000226 - microtubule cytoskeleton organization and biogenesis [Evidence ISS]; GO:0007018 - microtubule-based movement [Evidence IEA]; GO:0051258 - protein polymerization [Evidence IEA] codon_start : 1 product : tubulin, alpha 8 protein_id : NP_059075.1

name	Usp18 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755927 CCDS:CCDS20489.1 GeneID:24110 MGI:1344364
definition	GO_function : GO:0004197 - cysteine-type endopeptidase activity [Evidence IEA]; GO:0008234 - cysteine-type peptidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0019785 - ISG15-specific protease activity [Evidence IMP]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0004221 - ubiquitin thiolesterase activity [Evidence IEA] GO_process : GO:0032020 - ISG15-protein conjugation [Evidence IMP]; GO:0006512 - ubiquitin cycle [Evidence IEA]; GO:0006511 - ubiquitin-dependent protein catabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation note : ubiquitin specific protease 15 product : ubiquitin specific protease 18 protein_id : NP_036039.1

name	Slc6a13 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21362295 CCDS:CCDS20490.1 GeneID:14412 MGI:95629
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005328 - neurotransmitter:sodium symporter activity [Evidence IEA]; GO:0015293 - symporter activity [Evidence IEA] GO_process : GO:0006836 - neurotransmitter transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : gamma-aminobutyric acid (GABA-A) transporter 3 product : solute carrier family 6 (neurotransmitter transporter, GABA), member 13 protein_id : NP_653095.1

name	Slc6a12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:92110009 GeneID:14411 MGI:95628
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005328 - neurotransmitter:sodium symporter activity [Evidence IEA]; GO:0015293 - symporter activity [Evidence IEA] GO_process : GO:0006836 - neurotransmitter transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : gamma-aminobutyric acid (GABA-A) transporter 2 product : solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12 protein_id : NP_598422.2

name	Iqsec3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84781690 CCDS:CCDS20491.1 GeneID:243621 MGI:2677208
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005086 - ARF guanyl-nucleotide exchange factor activity [Evidence IEA] GO_process : GO:0032012 - regulation of ARF protein signal transduction [Evidence IEA] codon_start : 1 product : IQ motif and Sec7 domain 3 protein_id : NP_001028526.1

name	A2m (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28274695 GeneID:232345 MGI:2449119
definition	GO_function : GO:0004866 - endopeptidase inhibitor activity [Evidence IEA]; GO:0030414 - protease inhibitor activity [Evidence TAS] codon_start : 1 exception : unclassified translation discrepancy product : alpha-2-macroglobulin protein_id : NP_783327.1

name	EG640530 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149255293 GeneID:640530 MGI:3648717
definition	codon_start : 1 product : similar to Murinoglobulin 1 protein_id : XP_001480324.1

name	LOC666887 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666887
definition	number : 1 pseudo : _no_value

name	LOC666887 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666887
definition	number : 2 pseudo : _no_value

name	LOC100043486 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043486
definition	number : 1 pseudo : _no_value

name	LOC100043486 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043486
definition	number : 2 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:270156
definition	standard_name : PMC109228P1

name	(CDS detail)
type	STS
link
xref	UniSTS:163400
definition	standard_name : Z32767

name	(CDS detail)
type	STS
link
xref	UniSTS:235542
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:272408
definition	standard_name : PMC283554P1

name	(CDS detail)
type	STS
link
xref	UniSTS:178258
definition	standard_name : G67049

name	(CDS detail)
type	STS
link
xref	UniSTS:49002
definition	standard_name : D20S837

name	(CDS detail)
type	STS
link
xref	UniSTS:208024
definition	standard_name : AU022660

name	(CDS detail)
type	STS
link
xref	UniSTS:179453
definition	standard_name : AV168274

name	(CDS detail)
type	STS
link
xref	UniSTS:235545
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:142590
definition	standard_name : RH115429

name	(CDS detail)
type	STS
link
xref	UniSTS:235543
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:161675
definition	standard_name : RH124853

name	(CDS detail)
type	STS
link
xref	UniSTS:162787
definition	standard_name : RH126075

name	(CDS detail)
type	STS
link
xref	UniSTS:232022
definition	standard_name : RH142775

name	(CDS detail)
type	STS
link
xref	UniSTS:208027
definition	standard_name : AI132377

name	(CDS detail)
type	STS
link
xref	UniSTS:179451
definition	standard_name : AW538159

name	(CDS detail)
type	STS
link
xref	UniSTS:164341
definition	standard_name : AW048664

name	(CDS detail)
type	STS
link
xref	UniSTS:235539
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:208020
definition	standard_name : AU021805

name	(CDS detail)
type	STS
link
xref	UniSTS:121944
definition	standard_name : d4rat113

name	(CDS detail)
type	STS
link
xref	UniSTS:142945
definition	standard_name : EC100RL

name	(CDS detail)
type	STS
link
xref	UniSTS:130923
definition	standard_name : D6Mit369

name	(CDS detail)
type	STS
link
xref	UniSTS:235544
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:165487
definition	standard_name : AW125787

name	(CDS detail)
type	STS
link
xref	UniSTS:167485
definition	standard_name : RH127114

name	(CDS detail)
type	STS
link
xref	UniSTS:249716
definition	standard_name : AA818483

name	(CDS detail)
type	STS
link
xref	UniSTS:208025
definition	standard_name : AW105739

name	(CDS detail)
type	STS
link
xref	UniSTS:235540
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:208023
definition	standard_name : AU022477

name	(CDS detail)
type	STS
link
xref	UniSTS:159565
definition	standard_name : AU022477

name	(CDS detail)
type	STS
link
xref	UniSTS:141177
definition	standard_name : Bid

name	(CDS detail)
type	STS
link
xref	UniSTS:165485
definition	standard_name : AI875481

name	(CDS detail)
type	STS
link
xref	UniSTS:141176
definition	standard_name : Bid

name	(CDS detail)
type	STS
link
xref	UniSTS:224314
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:248252
definition	standard_name : BE109414

name	(CDS detail)
type	STS
link
xref	UniSTS:235546
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:142946
definition	standard_name : EC100RR

name	(CDS detail)
type	STS
link
xref	UniSTS:130761
definition	standard_name : D6Mit216

name	(CDS detail)
type	STS
link
xref	UniSTS:225199
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:179452
definition	standard_name : AW047653

name	(CDS detail)
type	STS
link
xref	UniSTS:225232
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:210070
definition	standard_name : RH136075

name	(CDS detail)
type	STS
link
xref	UniSTS:143157
definition	standard_name : Gabt3

name	(CDS detail)
type	STS
link
xref	UniSTS:143156
definition	standard_name : Gabt2

name	(CDS detail)
type	STS
link
xref	UniSTS:246714
definition	standard_name : BI295714

name	(CDS detail)
type	STS
link
xref	UniSTS:235547
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:227699
definition	standard_name : D4Arb40

clone name	MSMg01-434F24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052H10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-167O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-510E19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148M03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-482L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-546K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-342O07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-303B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361G11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-311C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-164D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-096K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-099L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-081E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-204A03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358I20
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-414J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-130N24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-469A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-379K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453G11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-527O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-189P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-201B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-109N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404L04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-191K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-449K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-142C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-171N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-509J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-520C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328J15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-426P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-201H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-171D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-159N08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-296A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-296A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-512O19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-348E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-265O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-057E15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-165E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-451J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-266K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-266K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-266K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-184M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-121N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-398P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-127C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-313C24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-179H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-533C22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-400P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-264P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-267K08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-137P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-370N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-173K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062L10
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-399M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391J01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-194H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404K14
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-359N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374M13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-292H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422L19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-321F04
singlet/doublet	singlet
plural/unique	plural

clone name	B6Ng01-057M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249C12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-347O22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100O13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013F15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-264H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088L11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108E20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064G15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003D06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-069B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-328E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083D18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345N17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019P19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-225O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248H13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341C22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288F18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180I21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030K13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-089O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337E17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187C22
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-201H11.T7 (MSMg01no201_h11.b1)	MSMg01-201H11.TJ (MSMg01no201_h11.g1)
ACC	AG387023	AG387024
length	800	706
length of high quality (start - end)	234 (134 - 367)	280 (77 - 356)
definition	CHROMAT_FILE: MSMg01no201_h11.b1 PHD_FILE: MSMg01no201_h11.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 20:21:40 2005	CHROMAT_FILE: MSMg01no201_h11.g1 PHD_FILE: MSMg01no201_h11.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 20:21:40 2005
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(120,714,104 - 120,714,335)	(120,555,149 - 120,555,427)
sequence	CGCCCTTTTTCCCCTCTCTGCTCTCCCCCCGAACCCCCCGCCCTCCCTTN NNCCATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXTTCGGACCGGGACC GNCGGAANCCAGTTTCCAAAAAAAACCCTGNCNCAAAAACAAAANTGNTT CAAACACCCTCAACATAAAACCAAACAACCCTTCCCCTCAAATAGCCTCC AAATTCAAATGCAAAAATCAATAGGCAAACTGTAAAATGTGAGAGCAAGT GTGGCTCACATCTGTAAATCCCAGGATTAGGGAGGCTGAGGCACCAAGAC TTATTTCCATACCAGACTGGGCTACCCAGCAAATTCCTGTCTCAAGCAAA TCACAAAACAATCACTTTTTTTTTTGAAGCGGGGAGAGAGACCCCGGNGN GAAGAAGATGGCACACCCCCCCCCCCCCCCCCACCNAAAAAAAACCGACA CAGGAAGAGGGGGGCCCCCCCCTTGAACAAAAAAAAAAAAAACAAACCCC CACGCCCCCCGACAGCCCACGACACAAACAACAAACACCCGCAACCCCCC CACCAACACCCCACCCAAGAACCAACCACCCCACACAAACACCCCCACAC CAACAACACAAAAAAACCCCACACACAAAAACCACACACAAACACAAAAA CCCCCCCACGACCAAACACCAANAACCCACCCCCACCCCACCACACCCCC CCCAAAAACAAAACAAAAAAATTTTTTTTTTCTCCCTCCCCGCACCTTAA TTATATCCCCCCTAATATCTATTTACCCCCGCCTATCTTTTATTTCCCCT	CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXCAGGGATCAAACCCAGAGTTTGAC GCATGTTGGGCAAGTAGAGATGATGTATCTGCGTCACTACCCCCACCCCT CTTTGCAGTTTATTTTGACTTTTTGTATTTCCCAGGCTGGTCTGGAGCTC ACTGTTTGACAAAGAATGGCTTTGAAATACCGCACTTCCCACCATCCCTT CTGAAGTGTTAAGATAGCAGGTGTGGGGCCACCAGAATGTCCAGTTGTTA AAAATTATGTACCTAGTTGTTTGGTGGTGGCAAATGCCTTTAATCCCAGC ACTCCTTATTCACACCCCCCCCCATCTCTGTAAGTTTAGAGGCCAGCCTG GTCTACAGACCCCCCTCCAAACAACCAGTGCAACACAGAGAAATCTTGAC TCATTAAAACCTAATTAACTAATTAACCTATATAAATTAATAAATTATTA ATTAATGAAATTAATATGTTATAAAGTATCTCTTGCTGCAGTACTAGGAT TTAAAAGCAGGGCAGGTCGCCACATGTACTATGTTTGCCCCCTATCTTTG CCCTTACTGCCAGCTTGCTTGTTTTGTTTAGATCGCCCATCTCCTATTGC ATGTTTCTGTGGAGCTTATTATGTTTTAATTCATACTTTTGCTTTTTCTT TCTCTG
quality values	Open. Hide. 7 15 7 7 6 7 9 9 17 24 17 10 10 6 6 6 8 7 6 8 8 8 8 8 8 8 8 13 8 7 7 8 10 9 11 28 12 10 8 7 7 8 9 10 8 8 8 10 3 0 0 0 3 9 9 9 13 13 10 11 11 11 11 12 27 28 39 39 21 14 10 13 13 19 15 16 17 24 24 30 21 21 10 9 9 6 7 6 6 6 6 6 6 6 6 6 6 6 8 9 3 0 3 14 15 18 3 0 3 17 9 7 7 8 8 8 6 7 8 15 12 10 10 10 8 12 17 23 23 3 0 3 0 3 17 21 37 47 47 47 44 27 21 3 0 3 3 0 3 25 25 44 47 47 50 41 48 37 47 47 47 47 47 57 50 50 50 50 50 40 43 35 39 39 43 43 57 54 43 43 43 43 46 48 48 54 59 59 57 57 57 57 57 57 47 47 47 57 57 57 57 57 57 57 57 57 54 54 54 59 59 59 47 43 41 47 57 57 47 47 44 57 44 48 48 59 59 59 59 59 59 54 54 54 57 57 57 48 48 39 44 44 43 43 44 44 59 44 43 43 59 47 47 43 43 43 57 57 59 59 59 59 57 48 48 48 59 59 59 57 57 57 42 37 37 42 42 42 39 28 28 18 18 28 32 39 31 32 20 24 24 37 41 59 59 32 28 15 12 18 11 11 11 11 19 25 37 47 47 59 47 43 43 40 40 40 43 39 39 35 39 39 59 59 57 57 57 48 48 43 47 43 43 48 48 48 59 59 48 48 43 43 39 40 30 28 28 28 37 37 59 59 48 48 48 59 48 50 41 41 37 23 21 11 8 8 8 8 11 11 22 22 19 17 11 11 14 16 12 11 17 16 9 9 9 19 22 34 19 14 9 7 7 7 10 10 3 0 3 0 3 9 18 23 21 9 9 9 12 9 9 6 6 6 6 7 6 10 8 8 8 11 15 19 32 32 35 37 31 21 14 11 8 8 3 0 3 6 6 9 9 9 9 10 10 10 8 8 8 6 6 6 6 8 8 8 8 8 8 8 14 11 9 9 9 9 9 10 21 14 10 9 10 9 9 11 11 11 19 15 16 11 13 16 16 21 14 11 11 11 13 13 16 12 14 13 13 16 13 10 8 8 8 8 8 12 12 7 7 7 7 8 8 9 9 9 6 6 10 10 8 8 8 8 10 9 6 6 6 6 8 8 8 8 8 10 11 8 8 8 8 8 11 15 15 20 20 20 8 11 7 6 6 6 6 6 6 8 9 9 8 8 8 10 10 10 10 8 6 8 13 8 8 8 8 9 9 10 10 12 10 8 8 8 12 10 8 6 6 6 6 8 10 13 12 7 7 8 8 10 10 8 8 8 10 8 10 8 8 8 9 10 10 11 10 15 15 12 12 8 8 6 6 6 6 8 8 10 6 6 6 6 8 6 6 6 6 6 6 8 11 7 8 9 7 8 8 7 7 12 12 6 7 8 8 11 8 8 8 8 10 10 13 10 10 8 8 8 8 13 15 3 0 3 6 6 8 6 8 8 8 15 11 10 9 8 10 10 14 12 12 12 12 21 19 17 16 11 11 11 14 18 23 18 25 13 12 9 9 8 10 8 8 6 6 6 6 9 14 13 11 11 17 19 34 34 39 37 28 21 11 22 9 9 9 11 10 10 13 13 9 9 9 9 8 8 8 8 8 8 8 8 19 8 9 9 11 9 10 10 8 8 8 8 8 8 8 8 8 8 8 11 9 9 11 11 15 15 16 10 10 9 15 12 10 10 10 12 12 13 11 11 10 10 13 10 8 8 8 8	Open. Hide. 6 6 6 10 12 8 8 8 8 15 17 26 27 28 37 37 37 47 42 50 50 50 50 50 50 50 50 47 27 27 12 15 12 12 10 10 10 10 10 11 15 18 28 23 33 36 36 50 53 36 36 33 33 33 33 25 25 11 9 9 12 12 11 9 9 9 23 23 37 31 33 33 33 33 33 36 36 36 35 35 36 36 37 37 53 50 50 57 57 53 50 50 48 57 54 54 57 59 59 68 68 68 57 57 57 59 59 68 68 68 68 68 68 68 68 48 44 24 30 26 39 39 42 43 57 57 68 68 68 68 68 57 57 57 54 54 57 57 59 59 68 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 51 50 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 54 54 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 57 57 57 57 57 57 48 48 48 57 57 59 59 68 59 59 59 59 59 59 59 59 59 57 57 57 57 57 57 59 57 57 57 57 43 43 43 43 43 43 40 35 35 47 39 48 48 57 57 57 57 57 50 50 50 50 50 50 47 59 30 28 13 12 12 12 12 11 12 16 21 24 24 30 28 35 35 32 32 30 32 37 43 43 44 43 39 39 39 39 39 57 48 48 48 48 48 41 34 30 21 17 12 12 11 11 12 12 11 11 11 16 10 10 10 11 12 14 10 10 10 10 11 12 19 18 28 28 41 47 48 48 48 43 37 37 30 30 34 37 35 28 32 23 23 21 28 21 20 20 24 29 37 22 16 10 10 9 9 11 12 11 8 8 9 9 9 9 9 12 12 12 11 17 11 11 8 8 12 8 12 12 15 16 11 11 11 12 12 6 8 8 8 8 8 18 11 11 9 9 9 10 10 10 19 12 15 19 27 23 20 11 11 12 18 11 11 9 9 9 23 18 22 22 28 23 26 13 11 11 18 18 15 15 11 11 8 10 8 8 8 10 13 15 11 8 8 8 13 8 10 12 21 11 16 13 15 15 20 12 11 11 8 8 8 8 8 13 12 11 10 10 12 11 11 10 10 12 19 19 23 26 18 15 10 10 12 12 11 11 10 10 12 8 9 9 11 9 10 8 8 8 8 11 15 11 11 11 11 8 8 8 8 8 12 13 9 9 10 11 12 8 8 8 8 8 8 8 8 6 7 6 8 8 12 10 10 10 11 19 17 18 10 14 9 9 9 10 9 8 8 8 8 8 8 8 8 8 10 10 12 9 8 15 8 8 8 13 18 21 15 15 8 8 8 8 11 8 8 8 8 8 8 11 13 10 10 10 10 9 9 8 8 8 8 9 9 9 8 8 8 10 8 8 8 8 15 15 10 8 8 8 8 8 8 8 8 8 8 12 12 10 8 8 6 6 6 6 8 8 12 8 8 6 7 8 12 13 10 10 8 12 12 8 8 8 8 8 8 10 9 10 9 9

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no201_h11.b1 MSMg01no201_h11.b1 CHROMAT_FILE:
MSMg01no201_h11.b1 PHD_FILE: MSMg01no201_h11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:21:40 2005
         (234 letters)



>mm_chr6_120714019_120714652
          Length = 634

 Score =  414 bits (214), Expect = e-120
 Identities = 227/232 (97%)
 Strand = Plus / Minus

                                                                       
Query: 1   caaaaacaaaantgnttcaaacaccctcaacataaaaccaaacaacccttcccctcaaat 60
           ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 caaaaacaaaattgtttcaaacaccctcaacataaaaccaaacaacccttcccctcaaat 258

                                                                       
Query: 61  agcctccaaattcaaatgcaaaaatcaataggcaaactgtaaaatgtgagagcaagtgtg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 agcctccaaattcaaatgcaaaaatcaataggcaaactgtaaaatgtgagagcaagtgtg 198

                                                                       
Query: 121 gctcacatctgtaaatcccaggattagggaggctgaggcaccaagacttatttccatacc 180
           |||||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||
Sbjct: 197 gctcacatctgtaaatcctaggattagggaggctgaggcaccaagactgagttccatacc 138

                                                               
Query: 181 agactgggctacccagcaaattcctgtctcaagcaaatcacaaaacaatcac 232
           ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 agactgggctacccagcaaattcctgtctcaagcaaatcacaaaacaatcac 86


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space:   140625
Effective search space used:   140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

Query= MSMg01no201_h11.g1 MSMg01no201_h11.g1 CHROMAT_FILE:
MSMg01no201_h11.g1 PHD_FILE: MSMg01no201_h11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:21:40 2005
         (280 letters)



>mm_chr6_120554949_120555628
          Length = 680

 Score =  462 bits (239), Expect = e-135
 Identities = 269/279 (96%)
 Strand = Plus / Plus

                                                                       
Query: 1   cagggatcaaacccagagtttgacgcatgttgggcaagtagagatgatgtatctgcgtca 60
           ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||
Sbjct: 201 cagggatcaaacccagagtttgatgcatggtgggcaagtagagatgatgtatctgcatca 260

                                                                       
Query: 61  ctacccccacccctctttgcagtttattttgactttttgtatttcccaggctggtctgga 120
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctacccccacccctgtttgcagtttattttgactttttgtatttcccaggctggtctgga 320

                                                                       
Query: 121 gctcactgtttgacaaagaatggctttgaaataccgcacttcccaccatcccttctgaag 180
           |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 321 gctcactgtttgacaaagaatggctttgaaataccgcacttcccgccttcccttctgaag 380

                                                                       
Query: 181 tgttaagatagcaggtgtggggccaccagaatgtccagttgttaaaaattatgtacctag 240
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgttaagataacaggtgtggggccaccagaatgtccagttgttaaaaattatgtacctag 440

                                                  
Query: 241 ttgtttggtggtggcaaatgcctttaatcccagcactcc 279
            ||  ||||||||||||||||||||||||||||||||||
Sbjct: 441 ctgggtggtggtggcaaatgcctttaatcccagcactcc 479


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 280
Length of database: 680
Length adjustment: 9
Effective length of query: 271
Effective length of database: 671
Effective search space:   181841
Effective search space used:   181841
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information