Query= MSMg01no201_p08.b1 MSMg01no201_p08.b1 CHROMAT_FILE:
MSMg01no201_p08.b1 PHD_FILE: MSMg01no201_p08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:22:35 2005
(307 letters)
>mm_chr6_139840953_139841661
Length = 709
Score = 580 bits (300), Expect = e-170
Identities = 304/306 (99%), Gaps = 2/306 (0%)
Strand = Plus / Plus
Query: 4 ggaattccacactaaacccagtagattattttccttggtaagacaaacttgaaagtgttt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccacactaaacccagtagattattttccttggtaagacaaacttgaaagtgttt 263
Query: 64 ttttacccttatagaaaattcataaacaaagcgaggacttcagaatcagggaactaggaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ttttacccttatagaaaattcataaacaaagcgaggacttcagaatcagggaactaggaa 323
Query: 124 caggactctgcagttacagcttcctagattacattattattttttttt--gtaacatcga 181
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 324 caggactctgcagttacagcttcctagattacattattatttttttttttgtaacatcga 383
Query: 182 acagtcattggatttcggtttatccacagaggaaacaattttactgtcgttctagaggat 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 acagtcattggatttcggtttatccacagaggaaacaattttactgtcgttctagaggat 443
Query: 242 gagaggcccatcacgaggcatttggcgaagtgcttgccaaaagatgtagacttcctaagg 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gagaggcccatcacgaggcatttggcgaagtgcttgccaaaagatgtagacttcctaagg 503
Query: 302 gtaaag 307
||||||
Sbjct: 504 gtaaag 509
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 307
Length of database: 709
Length adjustment: 9
Effective length of query: 298
Effective length of database: 700
Effective search space: 208600
Effective search space used: 208600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no201_p08.g1 MSMg01no201_p08.g1 CHROMAT_FILE:
MSMg01no201_p08.g1 PHD_FILE: MSMg01no201_p08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:22:35 2005
(279 letters)
>mm_chr6_139990166_139990844
Length = 679
Score = 511 bits (264), Expect = e-149
Identities = 273/276 (98%)
Strand = Plus / Minus
Query: 1 tttgcttttgaccgtttttctcagcacattgcaatttccatttgggtagtgatcattcac 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 tttgcttttgactgtttttctcagcacattgcaatttccatttgggtagtgatcattcac 417
Query: 61 atagagttttaaggcacacataacaacggatcttaggtactccgtctcattccgaatgat 120
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 416 atagagttttaaggcacacataacaacggatcttaggtactcggtctcattccgaatgat 357
Query: 121 tccgtgactttggatatccctcagctgattctggagtaggtcaaacctgaaagaaagttt 180
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 356 tccgtgactttggatatccctcagttgattctggagtaggtcaaacctgaaagaaagttt 297
Query: 181 gctctggtagtcaaagaagcggaagtcacccatcacattgtggtgagacaggaggactgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 gctctggtagtcaaagaagcggaagtcacccatcacattgtggtgagacaggaggactgg 237
Query: 241 gttgccgtcgatgcagagtgggacacagtatttttg 276
||||||||||||||||||||||||||||||||||||
Sbjct: 236 gttgccgtcgatgcagagtgggacacagtatttttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 279
Length of database: 679
Length adjustment: 9
Effective length of query: 270
Effective length of database: 670
Effective search space: 180900
Effective search space used: 180900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
