Query= MSMg01no207_b11.b1 MSMg01no207_b11.b1 CHROMAT_FILE:
MSMg01no207_b11.b1 PHD_FILE: MSMg01no207_b11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:29:34 2005
(414 letters)
>mm_chr6_97837703_97838517
Length = 815
Score = 714 bits (369), Expect = 0.0
Identities = 399/409 (97%), Gaps = 1/409 (0%)
Strand = Plus / Minus
Query: 7 attctcagagatttcatacttaaaaaagtgaggcactc-attaaacctgagatcaacttt 65
||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||
Sbjct: 615 attctcagagatttcatacttaaaagagtgaggcactcaattaaacctgagatcaacttt 556
Query: 66 caacctcaaacatgtaggcaccccaacacatggctctcaattgtcaccccattctagtgc 125
|||||||||||||||||||| | |||||||||||||||| |||||||||||||||||||
Sbjct: 555 caacctcaaacatgtaggcatcaaaacacatggctctcaaatgtcaccccattctagtgc 496
Query: 126 catctctgtctcttccccccgccccccgcccgagtgtggcatttgttctatcacactgat 185
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 495 catctctgtctcttccccccaccccccgcccgagtgtggcatttgttctatcacactgat 436
Query: 186 acagtactcacccagaaagaggaagagaagaggcctgcctctagccctatctcaggatgc 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 acagtactcacccagaaagaggaagagaagaggcctgcctctagccctatctcaggatgc 376
Query: 246 aagggaagaagcggtccacccttgactgtccatttaaccactcaggattatcagtggaga 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 aagggaagaagcggtccacccttgactgtccatttaaccactcaggattatcagtggaga 316
Query: 306 taaacagcactgctcgaagtccccagaaaccaacggggcctctcagcagcctggtccata 365
||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 315 taaacagcactgcacaaagtccccataaaccaacggggcctctcagcagcctggtccata 256
Query: 366 gctctggaaagcacccaacacagcatgatggtcagtttgttgtgtttta 414
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 gctctggaaagcacccaacacagcatgatggtcagtttgttgtgtttta 207
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 414
Length of database: 815
Length adjustment: 9
Effective length of query: 405
Effective length of database: 806
Effective search space: 326430
Effective search space used: 326430
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no207_b11.g1 MSMg01no207_b11.g1 CHROMAT_FILE:
MSMg01no207_b11.g1 PHD_FILE: MSMg01no207_b11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:29:34 2005
(382 letters)
>mm_chr6_97723310_97724090
Length = 781
Score = 615 bits (318), Expect = e-180
Identities = 366/382 (95%), Gaps = 1/382 (0%)
Strand = Plus / Plus
Query: 1 acagttgttcggttcatgagaaaggatgtctctgagttcctagctgaacagatgccctgg 60
|||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |
Sbjct: 201 acagttgttcggttcatgagaaaggatgtctctgagttccaagctgaacagatgtcctag 260
Query: 61 aggaatccaggaaagcaggtgattggcagtttatgttggaatcctgaagaactaggttct 120
|||||||| ||||||| |||||||| ||||||||||||||||||||||||| ||||||||
Sbjct: 261 aggaatcctggaaagctggtgattgtcagtttatgttggaatcctgaagaagtaggttct 320
Query: 121 aatgcagataagggaatgctttaggaacagaatagatggacttggacagtgggagtgaaa 180
||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||
Sbjct: 321 aatgcagataaggaaatgctttaggaacagaatagatcgacttggacagtgagagtgaat 380
Query: 181 gcccctacgataaacccttgcaaatacagggatgtattggaagaactaggaggtgtggag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcccctacgataaacccttgcaaatacagggatgtattggaagaactaggaggtgtggag 440
Query: 241 agaatggaaatctccacccccagacatctgggaaagagcctaaaagcttggttaaaaaaa 300
|||||||||||||||||| ||||||| ||||||||||||||| | |||||||||||||||
Sbjct: 441 agaatggaaatctccacctccagacaactgggaaagagcctaga-gcttggttaaaaaaa 499
Query: 301 aggaccttgaacaggatggtgtggtacacctataatccctgcactgagctacatagcaag 360
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 500 aggaccttgaacaggatggtgtggtacacctataattcctgcactgagctacatagcaag 559
Query: 361 tacaaggacagcctgtgatctt 382
||||||||||||||||||||||
Sbjct: 560 tacaaggacagcctgtgatctt 581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 382
Length of database: 781
Length adjustment: 9
Effective length of query: 373
Effective length of database: 772
Effective search space: 287956
Effective search space used: 287956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
