Query= MSMg01no207_e24.b1 MSMg01no207_e24.b1 CHROMAT_FILE:
MSMg01no207_e24.b1 PHD_FILE: MSMg01no207_e24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:30:05 2005
(223 letters)
>mm_chr6_98291612_98292235
Length = 624
Score = 383 bits (198), Expect = e-111
Identities = 210/214 (98%), Gaps = 1/214 (0%)
Strand = Plus / Minus
Query: 10 gaattctttttatatctctaattctgcttcctcctcagatgtcagaaattgagttggaaa 69
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 gaattctttttatatctctaattctgcttcctcctcagatgtcagaaattgagttggaaa 364
Query: 70 agatcatagtaagaacagccgagcattttgaaaatggcaaaaataaccttccttggttaa 129
|||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 agataaaagtaagaacagccgagcattttgaaaatggcaaaaataaccttccttggttaa 304
Query: 130 aagaaggtaagctgtcttcttctggactttccttctactgcagtgaaaatggcgcttttg 189
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 aagaaggtaagccgtcttcttctggactttccttctactgcagtgaaaatggcgcttttg 244
Query: 190 cttacagtcagaagatgggttgggg-aggggtgg 222
||||||||||||||||||||||||| ||||||||
Sbjct: 243 cttacagtcagaagatgggttgggggaggggtgg 210
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 223
Length of database: 624
Length adjustment: 9
Effective length of query: 214
Effective length of database: 615
Effective search space: 131610
Effective search space used: 131610
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no207_e24.g1 MSMg01no207_e24.g1 CHROMAT_FILE:
MSMg01no207_e24.g1 PHD_FILE: MSMg01no207_e24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:30:05 2005
(378 letters)
>mm_chr6_98214277_98215054
Length = 778
Score = 700 bits (362), Expect = 0.0
Identities = 374/378 (98%)
Strand = Plus / Plus
Query: 1 aaggacagtaaaatagatcttatacgatgtgaatcaagttattttggctgtgctcccgct 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaggacagtaaaatagatcttatacgatgtgaatcaagttattttggctgtgctcccgcg 260
Query: 61 ccttcagaaccggatgcatatggttatgtctttattaaggctatttcccaacattacatt 120
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 261 ccttcagaaccggatgcatatggttatgtctttattaaggctattttccaacattacatt 320
Query: 121 cagggcactgcaaaatcagatgatgataaccaccgggcctcatcccgtcagctgggtaga 180
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 321 cagggcactgcaaaatcagatgatgataaccatcgggcctcatcccgtcagctgggtaga 380
Query: 181 taacttgtctgattcctccctgagatgcccaatcaattcagctgttgtaaaaaggaacaa 240
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgacttgtctgattcctccctgagatgcccaatcaattcagctgttgtaaaaaggaacaa 440
Query: 241 tggaactgggctgaaacttccagaacctgatggtaaggactctggctcttgcctgcttca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tggaactgggctgaaacttccagaacctgatggtaaggactctggctcttgcctgcttca 500
Query: 301 taaacaacagcaggtggtcttgccagcatccgatactctgtcccctttgcttttgacttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taaacaacagcaggtggtcttgccagcatccgatactctgtcccctttgcttttgacttc 560
Query: 361 tcctcatgtcttctaagc 378
||||||||||||||||||
Sbjct: 561 tcctcatgtcttctaagc 578
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 378
Length of database: 778
Length adjustment: 9
Effective length of query: 369
Effective length of database: 769
Effective search space: 283761
Effective search space used: 283761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|