Query= MSMg01no211_b07.b1 MSMg01no211_b07.b1 CHROMAT_FILE:
MSMg01no211_b07.b1 PHD_FILE: MSMg01no211_b07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:35:56 2005
(262 letters)
>mm_chr6_9014218_9014879
Length = 662
Score = 346 bits (179), Expect = e-100
Identities = 203/213 (95%), Gaps = 4/213 (1%)
Strand = Plus / Minus
Query: 5 gaattctgcatgaatatcagaatcatttggaattcttttacaagctgtatacttgaattt 64
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 350 gaattctgcatgaatatcagaatcacttggaattcttttacaagctgtatacttgaattt 291
Query: 65 aaacaaaaacatcagccgactctaaaactgtcatagtgataacacacttagatgtcgaaa 124
|||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 290 aaacaagaacatcaggtgactctaaaactgtcagagtgataacacacttagatgtcgaaa 231
Query: 125 attgttgttttgtatttgtaggtgatattttgcttgcttgcttgcttgcttgcttgcttg 184
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 230 attgttgttttgtatttgtaggtga----ttgcttgcttgcttgcttgcttgcttgcttg 175
Query: 185 cttgcttgcttgcttgcttgcttgcttgcttgc 217
||||||||||||||||||| |||||||||||||
Sbjct: 174 cttgcttgcttgcttgctttcttgcttgcttgc 142
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 47
Number of extensions: 22
Number of successful extensions: 22
Number of sequences better than 10.0: 1
Number of HSP's gapped: 19
Number of HSP's successfully gapped: 1
Length of query: 262
Length of database: 662
Length adjustment: 9
Effective length of query: 253
Effective length of database: 653
Effective search space: 165209
Effective search space used: 165209
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no211_b07.g1 MSMg01no211_b07.g1 CHROMAT_FILE:
MSMg01no211_b07.g1 PHD_FILE: MSMg01no211_b07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:35:56 2005
(286 letters)
>mm_chr6_8912508_8913193
Length = 686
Score = 503 bits (260), Expect = e-147
Identities = 278/284 (97%)
Strand = Plus / Plus
Query: 3 taacctcgagcaaatctcagcttcttcatctgtaatatgtgactaatccactccttttgc 62
||||||| ||||||||||||||||||||||||||||||| |||||||| |||||| ||||
Sbjct: 203 taacctcaagcaaatctcagcttcttcatctgtaatatgagactaatctactcctcttgc 262
Query: 63 acaacagagttattgttggggagtcactgagttagtgtgataaggagcttagaaggatgg 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 acaacagagttattgttggggagtcactgagttagtgtgataaggagcttagaaggatgg 322
Query: 123 gtagagtacaaagatgatgcggaatgagtaaagacattgcttctcttaacaaagaaaggt 182
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 323 ctagagtacaaagatgatgcggaatgagtaaagacattgctactcttaacaaagaaaggt 382
Query: 183 ttctgggacagccttccaggtagtgcctgcagagtccctggagtggtgacacacaagggt 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ttctgggacagccttccaggtagtgcctgcagagtccctggagtggtgacacacaagggt 442
Query: 243 tcattgatggctacctttttctttgtttagtttttctagtagtt 286
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tcattgatggctacctttttctttgtttagtttttctagtagtt 486
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
