Query= MSMg01no212_h04.b1 MSMg01no212_h04.b1 CHROMAT_FILE:
MSMg01no212_h04.b1 PHD_FILE: MSMg01no212_h04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:38:13 2005
(317 letters)
>mm_chr6_83756328_83757042
Length = 715
Score = 555 bits (287), Expect = e-162
Identities = 303/309 (98%), Gaps = 2/309 (0%)
Strand = Plus / Plus
Query: 5 gaattccaaggaaaaaaaaaacaacccaaaacttttttgtaattggggctgagtctgtag 64
||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 205 gaattccaaggaaaaaaaa--caacccaaaacttttttgtaattggggctaagtctgtag 262
Query: 65 tctcgggtacaactgtgcttcctcacaacactggatagtaaaagagttgggtcacaggaa 124
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tctcgggtacaattgtgcttcctcacaacactggatagtaaaagagttgggtcacaggaa 322
Query: 125 taagtcattccatacattactaagggccagttcactggctgcatcccaagcctacagtca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 taagtcattccatacattactaagggccagttcactggctgcatcccaagcctacagtca 382
Query: 185 gcaccctgcctctgaggttgactcaacacactagctcttggattccaggtatacccaaca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gcaccctgcctctgaggttgactcaacacactagctcttggattccaggtatacccaaca 442
Query: 245 acatacacccctgaaagcaggatagagaatgacatccaaataaaatgagccagcacagcg 304
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 443 gcatacacccctgaaagcaggataaagaatgacatccaaataaaatgagccagcacagcg 502
Query: 305 ggagggagg 313
|||||||||
Sbjct: 503 ggagggagg 511
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 715
Length adjustment: 9
Effective length of query: 308
Effective length of database: 706
Effective search space: 217448
Effective search space used: 217448
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no212_h04.g1 MSMg01no212_h04.g1 CHROMAT_FILE:
MSMg01no212_h04.g1 PHD_FILE: MSMg01no212_h04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:38:13 2005
(282 letters)
>mm_chr6_83863027_83863707
Length = 681
Score = 530 bits (274), Expect = e-155
Identities = 280/282 (99%), Gaps = 1/282 (0%)
Strand = Plus / Minus
Query: 1 aaaaaataaactacctgagtggtgaacatctataatcctgattgattttacccatgaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aaaaaataaactacctgagtggtgaacatctataatcctgattgattttacccatgaaaa 302
Query: 61 agattgggctaaaatttttttaactgttttcttcaatgttctatctttttaaattgactc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agattgggctaaaatttttttaactgttttcttcaatgttctatctttttaaattgactc 242
Query: 121 agttatgccaatataagctagttcaaaaaaaattaaaggactgcaggacagtggtgaact 180
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 241 agttatgccaatataagctagttcaaaaaaa-ttaaaggactgcaggacagtggtgaact 183
Query: 181 gcctttaatcccagcacctgggaggcaaaggcaggtggatttctgagttcgaggccagcc 240
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 182 gcctttaatcccagcacctgggaggcagaggcaggtggatttctgagttcgaggccagcc 123
Query: 241 tggtctagagtgagttccaggacagccagggctacacagaga 282
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 tggtctagagtgagttccaggacagccagggctacacagaga 81
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 681
Length adjustment: 9
Effective length of query: 273
Effective length of database: 672
Effective search space: 183456
Effective search space used: 183456
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
