Query= MSMg01no213_o22.b1 MSMg01no213_o22.b1 CHROMAT_FILE:
MSMg01no213_o22.b1 PHD_FILE: MSMg01no213_o22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:40:06 2005
(316 letters)
>mm_chr6_83008222_83008937
Length = 716
Score = 551 bits (285), Expect = e-161
Identities = 303/313 (96%), Gaps = 8/313 (2%)
Strand = Plus / Plus
Query: 6 ggaattcagtatcattcaccagacccaaggccttactggctgccctgcttttcgtaggtt 65
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 ggaattcagtatcagtcaccagacccaaggccttactggctgccctgcttttcgtaggtt 265
Query: 66 ctatgag----ttttcaccctggcctctgggctggcagaagagtctgaactgagtcctgg 121
||||||| |||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 ctatgagcagc----caccatggcctctgggctggcagaagagtctgaactgagtcctgg 321
Query: 122 ggagtctgagctggctgtgaacccctttgatgggctccccttctcctcctgctactatga 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ggagtctgagctggctgtgaacccctttgatgggctccccttctcctcctgctactatga 381
Query: 182 gctgcttgagcagcgtagagccctgcccatctgggctgctcgcttcctgttcttggagca 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 gctgcttgagcagcgtagagccctgcccatctgggctgctcgcttcctgttcttggagca 441
Query: 242 tttggagagtagccccactggagtggtgctggtatctggggaccctggctctggcaagag 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 tttggagagtagccccactggagtggtgctggtatctggggaccctggctctggcaagag 501
Query: 302 cacccaggtggag 314
|||||||||||||
Sbjct: 502 cacccaggtggag 514
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 716
Length adjustment: 9
Effective length of query: 307
Effective length of database: 707
Effective search space: 217049
Effective search space used: 217049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no213_o22.g1 MSMg01no213_o22.g1 CHROMAT_FILE:
MSMg01no213_o22.g1 PHD_FILE: MSMg01no213_o22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:40:06 2005
(298 letters)
>mm_chr6_83082910_83083607
Length = 698
Score = 455 bits (235), Expect = e-132
Identities = 238/239 (99%)
Strand = Plus / Minus
Query: 1 tcattttccgtgtttgtttttaagcatggaacccatctttccagatgaaatttgacctgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tcattttccgtgtttgtttttaagcatggaacccatctttccagatgaaatttgacctgg 380
Query: 61 aatgtgtgacacactctgaacctgagggctgtgatagaaacaggtgctgcagcctctctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 aatgtgtgacacactctgaacctgagggctgtgatagaaacaggtgctgcagcctctctc 320
Query: 121 tcacctgctctctgcatccctgaagggcaggacacaagagcttctagaagagtgagagga 180
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 tcgcctgctctctgcatccctgaagggcaggacacaagagcttctagaagagtgagagga 260
Query: 181 cacctctaagagccaggcaagacctaaaaaagcagactccgggagagaaaactgagctc 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 cacctctaagagccaggcaagacctaaaaaagcagactccgggagagaaaactgagctc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 298
Length of database: 698
Length adjustment: 9
Effective length of query: 289
Effective length of database: 689
Effective search space: 199121
Effective search space used: 199121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
