TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCACCTAAAAATATATGTGTGCACATATATACATGATCTACAGAATGG
ATAGATGGCTCAGTAGTAAAGACCATCCATCTGCTCTTGCAGAATAGAAG
TGGGGTGAGGCAGAGGTCAATTCCAAGCTCCAATGTGCCAGCTGACCACT
GTCTGTAACTCCAGTTCCAGTGGCAGCTGACCACTGTCTGTAACTCCAGT
TCCAGAGAATCCAATACCCTCTCTGGCCTCTGACGCCACTGCAGGTACTC
TTGGGTGTGTGCAGGTGTATGTATATGTACATGTGTGTGTCTCTGTGTGC
GCATGTCTGTGTGTGTGCATGCCCACCCCCGCGTGTATGCACATGTGTGT
ATGTGTCTGACACAGACACCCCGACAATAGAAATAGGCTGAATAGAAGTT
AATTCAGTGTTTAAAACCTGTCCTTTTCTAAGTGTTAATGTTTTCAAGAG
TGCTTTTAAATATCCATGTTGTCAGGTCATATCACTGAGTCAATGTCTTA
TCTTGGAATCAGACATGGCAAGCCCAAAGCAAGCAATAAATAGCACACTG
GACATTCATATTTCACAGAGTGCTCTGTGCGCATTCCTACTGAGCTCTGA
TATCAGTAGATCCTATCTGAAGGGTTTTCACTGTTGAACAGCCAAGCAAA
GCATGGAGGTGTCCTCCTGAATTCCTGAGN

CGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAGGTGGGCAGCCCAAATTTGAGTC
AGTGTGTTATAAAGAAAAATTGAAACCAAAAAGAAGAGAGGACAAGACAT
TGGACAGGCAGGTAGTCAGAGTTGATCTGGGAAAGAAGAATATGATCAAA
ATACATTGTGTGAAATTCCCTAAGAATTAATTAAAAAATTAAACAACAAC
AACAAAGCTTCAAGCAAGCACCACAGCTCCCACAAAGACATCTTTCTGAA
CCTTGGGATCCTTGAAGGAAACACCTTGTTGGCAGGGTGTAAGCGTCCTC
CGAATCTGGGGCATCGAACGCTAGGATGCCAGAGGAAGGCTTTGCCAGCC
TTGCTGTGTGCTGCCATGTGGCGCGCCGGAGCGGGCACAGGCAGGGCCTG
GATGCAAACTTGGCATTCAATAGCCAGATAGGGTTTTAAATAGATCCCTG
GAAAGAGCAAGCTAGAGAACAGAGGATTCTTTTCCAACACACTCGAGTAG
AAACAGATCGAAGATGGGAACTTACGTGAAGACTTAGAGTCAGGAAAATG
CACTCACGGGAGGACTGGATGCTCTGGCTTCTAGAACAATCCTGGGGCAG
AAAGAAGTTCTGTGAATAAAGTGGCTGGCTCACAAGCATGAGGGCCTGAG
CTTGAGATCCTCAGGACCCACAAAAACAGCCAGATAT

Query= MSMg01no216_m10.g1 MSMg01no216_m10.g1 CHROMAT_FILE:
MSMg01no216_m10.g1 PHD_FILE: MSMg01no216_m10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:43:55 2005
         (519 letters)



>mm_chr6_144407732_144408650
          Length = 919

 Score =  957 bits (495), Expect = 0.0
 Identities = 513/519 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaaagaagagaggacaagacattggacaggcaggtagtcagagttgatctgggaaagaag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaaagaagagaggacaagacattggacaggcaggtagtcagagttgatctgggaaagaag 260

                                                                       
Query: 61  aatatgatcaaaatacattgtgtgaaattccctaagaattaattaaaaaattaaacaaca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aatatgatcaaaatacattgtgtgaaattccctaagaattaattaaaaaattaaacaaca 320

                                                                       
Query: 121 acaacaaagcttcaagcaagcaccacagctcccacaaagacatctttctgaaccttggga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acaacaaagcttcaagcaagcaccacagctcccacaaagacatctttctgaaccttggga 380

                                                                       
Query: 181 tccttgaaggaaacaccttgttggcagggtgtaagcgtcctccgaatctggggcatcgaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tccttgaaggaaacaccttgttggcagggtgtaagcgtcctccgaatctggggcatcgaa 440

                                                                       
Query: 241 cgctaggatgccagaggaaggctttgccagccttgctgtgtgctgccatgtggcgcgccg 300
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||| | |  |
Sbjct: 441 cgctaggatgccagaggaaggatttgccagccttgctgtgtgctgccatgtggtgtggtg 500

                                                                       
Query: 301 gagcgggcacaggcagggcctggatgcaaacttggcattcaatagccagatagggtttta 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gagcgggcacaggcagggcctggatgcaaacttggcattcaatagccagatagggtttta 560

                                                                       
Query: 361 aatagatccctggaaagagcaagctagagaacagaggattcttttccaacacactcgagt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aatagatccctggaaagagcaagctagagaacagaggattcttttccaacacactcgagt 620

                                                                       
Query: 421 agaaacagatcgaagatgggaacttacgtgaagacttagagtcaggaaaatgcactcacg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agaaacagatcgaagatgggaacttacgtgaagacttagagtcaggaaaatgcactcacg 680

                                                  
Query: 481 ggaggactggatgctctggcttctagaacaatcctgggg 519
           ||||||||||||||||||||||||||||||||| |||||
Sbjct: 681 ggaggactggatgctctggcttctagaacaatcttgggg 719


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 519
Length of database: 919
Length adjustment: 10
Effective length of query: 509
Effective length of database: 909
Effective search space:   462681
Effective search space used:   462681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)