Query= MSMg01no231_i23.b1 MSMg01no231_i23.b1 CHROMAT_FILE:
MSMg01no231_i23.b1 PHD_FILE: MSMg01no231_i23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:47:53 2005
(324 letters)
>mm_chr6_77644014_77644738
Length = 725
Score = 592 bits (306), Expect = e-173
Identities = 315/318 (99%), Gaps = 1/318 (0%)
Strand = Plus / Minus
Query: 5 gaattccacattctggtgcatcttttcttaatttggtgagaaatttgattcatacaccat 64
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 522 gaattccacattctggtgcatcttttcttaatttggtaagaaatttgattcatacaccat 463
Query: 65 catatgtttttctttttatttcctccttttcttggcatttctggaatttccattccaatt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 catatgtttttctttttatttcctccttttcttggcatttctggaatttccattccaatt 403
Query: 125 aaatattatggtagggctcaaagg-aagtttattttcaaaagtggtagttcagttgccag 183
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 402 aaatattatggtagggctcaaaggaaagtttattttcaaaagtggtagttcagttgccag 343
Query: 184 gaaacagcatgtcagtagtaagaaatagaactagaaatgacagatggaagctgtagcttt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 gaaacagcatgtcagtagtaagaaatagaactagaaatgacagatggaagctgtagcttt 283
Query: 244 cccacttggccagaatcttcactttgagattgtctttcatctagctcataaaggatgcag 303
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 282 cccacttggccagaatcttcactttgagattgtctttcagctagctcataaaggatgcag 223
Query: 304 aatctccagccagctctg 321
||||||||||||||||||
Sbjct: 222 aatctccagccagctctg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 725
Length adjustment: 9
Effective length of query: 315
Effective length of database: 716
Effective search space: 225540
Effective search space used: 225540
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no231_i23.g1 MSMg01no231_i23.g1 CHROMAT_FILE:
MSMg01no231_i23.g1 PHD_FILE: MSMg01no231_i23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:47:53 2005
(199 letters)
>mm_chr6_77519801_77520399
Length = 599
Score = 354 bits (183), Expect = e-102
Identities = 192/195 (98%)
Strand = Plus / Plus
Query: 1 ccagacttaatgaagtgtacaggacaggtctgcattctgattggaaggcattctctcctt 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 201 ccagacttaatgaagtgtacaggacaggtctgcattctgattggaaagcattctctcctt 260
Query: 61 ctctacttattaaacatgacagttacttacgatgaatgcttctccaccctgagaatgtcc 120
||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 261 ctctacttattaaacatgacagttacttacgatgaatgcttctccaccccgataatgtcc 320
Query: 121 ttcgtgtgcttcagtagcttgtgtgtttccaacacacttgcatgtacttgcttttccctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttcgtgtgcttcagtagcttgtgtgtttccaacacacttgcatgtacttgcttttccctc 380
Query: 181 tgctataaccaattt 195
|||||||||||||||
Sbjct: 381 tgctataaccaattt 395
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 199
Length of database: 599
Length adjustment: 8
Effective length of query: 191
Effective length of database: 591
Effective search space: 112881
Effective search space used: 112881
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
