Query= MSMg01no233_e03.b1 MSMg01no233_e03.b1 CHROMAT_FILE:
MSMg01no233_e03.b1 PHD_FILE: MSMg01no233_e03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:49:56 2005
(249 letters)
>mm_chr6_92172181_92172829
Length = 649
Score = 482 bits (249), Expect = e-140
Identities = 249/249 (100%)
Strand = Plus / Minus
Query: 1 aaaaacaaaagaaaacaaatacaagctcaaataaagaaagaaaacaaatatatctaacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 aaaaacaaaagaaaacaaatacaagctcaaataaagaaagaaaacaaatatatctaacct 390
Query: 61 aaaattttacacctagattgggctttacatttttgaaagtgaattgttttcaagagaaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 aaaattttacacctagattgggctttacatttttgaaagtgaattgttttcaagagaaat 330
Query: 121 gacaagcaacttatagatcttaaaagactggaccagagatccagccacagctcaagcctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 gacaagcaacttatagatcttaaaagactggaccagagatccagccacagctcaagcctt 270
Query: 181 ggaacctctgaggcttgagagagagaagggggcagggggatggggagaggctgggggatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 ggaacctctgaggcttgagagagagaagggggcagggggatggggagaggctgggggatt 210
Query: 241 cactcagtg 249
|||||||||
Sbjct: 209 cactcagtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no233_e03.g1 MSMg01no233_e03.g1 CHROMAT_FILE:
MSMg01no233_e03.g1 PHD_FILE: MSMg01no233_e03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:49:56 2005
(657 letters)
>mm_chr6_92052100_92053157
Length = 1058
Score = 1241 bits (642), Expect = 0.0
Identities = 654/658 (99%), Gaps = 1/658 (0%)
Strand = Plus / Plus
Query: 1 aagagatggtacaggaagtggacaaggcctataaagctgtgacaatgaaataatggtggt 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 201 aagagatggtacaggaagtggacaaggcctataaagctgtgacagtgaaataatggtggt 260
Query: 61 agtaaacagaaagataaataaccagtggtggactagagaacctgccattatatgtacaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agtaaacagaaagataaataaccagtggtggactagagaacctgccattatatgtacaca 320
Query: 121 ctcagaaggaaacctgagttatgatggcagagatgacattacagatcagtgatgaaagga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctcagaaggaaacctgagttatgatggcagagatgacattacagatcagtgatgaaagga 380
Query: 181 taggtcgttcagtccacggtgctgggaaattgatgtctgtgcctgactcatcacactcaa 240
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 381 taggtcgttcagtccacggtgctggaaaattgatgtctgtgcctgactcatcacactcaa 440
Query: 241 aaaactaatgggcacatggattaagagcttacaaagtgaatgataacattatttagcact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaaactaatgggcacatggattaagagcttacaaagtgaatgataacattatttagcact 500
Query: 301 tatataataaaatatgtaccatggtatttttaaccctagggtaggacagaatgtccttaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tatataataaaatatgtaccatggtatttttaaccctagggtaggacagaatgtccttaa 560
Query: 361 aacattaaaatgcagactgccagggctggcaggatggcttggggtaggtgcttcaatctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aacattaaaatgcagactgccagggctggcaggatggcttggggtaggtgcttcaatctt 620
Query: 421 tagagcccttgtaaaggcagaagaatcagctgcaaattatccttttcacatgtgcaccac 480
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 621 tagagcccttgtaaaggcagaagaatcagctgcaaattatcctcttcacatgtgcaccac 680
Query: 481 cacatacacatgcatccccactgtatgctaataagtaaaaaaagtaatacacacttctaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cacatacacatgcatccccactgtatgctaataagtaaaaaaagtaatacacacttctaa 740
Query: 541 aa-attgatccattcagcattaatatcatactgctagtcaagacatgttaaaggatgggt 599
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aatattgatccattcagcattaatatcatactgctagtcaagacatgttaaaggatgggt 800
Query: 600 gaagacattcacaaatgtatacacttacacagtcaaatagtatccagaatccttaggt 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gaagacattcacaaatgtatacacttacacagtcaaatagtatccagaatccttaggt 858
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1058
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1048
Effective search space: 678056
Effective search space used: 678056
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
