Query= MSMg01no236_b13.b1 MSMg01no236_b13.b1 CHROMAT_FILE:
MSMg01no236_b13.b1 PHD_FILE: MSMg01no236_b13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:53:34 2005
(686 letters)
>mm_chr6_75402682_75403767
Length = 1086
Score = 1266 bits (655), Expect = 0.0
Identities = 676/683 (98%), Gaps = 1/683 (0%)
Strand = Plus / Plus
Query: 5 gaattcactagattgtccaaatgtagtcctttagacaacaacaacaacaactaaaaatgt 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcactagattgtcaaaatgtagtcctttagacaacaacaacaacaactaaaaatgt 264
Query: 65 taagtttgtcgaatcttgacagaggaatggcaaatgtgagaaaaggatgggacctggagt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 taagtttgtcgaatcttgacagaggaatggcaaatgtgagaaaaggatgggacctggagt 324
Query: 125 ttgatacgggtgcaggatagattatgaggactggggcatgtttagagcttaacattgact 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttgatacgggtgcaggatagattatgaggactggggcatgtttagagcttaacattgact 384
Query: 185 tcacaagagtagacagtgagaacaatgaagttatcttaaggtagttctcttcttagaaat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tcacaagagtagacagtgagaacaatgaagttatcttaaggtagttctcttcttagaaat 444
Query: 245 tagccaacttacttggataaaaggcctactttccatttatatacatttaagcaagtcaat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tagccaacttacttggataaaaggcctactttccatttatatacatttaagcaagtcaat 504
Query: 305 atattcctcgtagtttcttccttaaatttgaccatagaacagggaattattttctatata 364
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 505 atattcctcgtagtttcttccttaaatttgaccatagaacagggaattatttgctataca 564
Query: 365 gatttgttaatgagaatgacacatgtaaactttacttttatctgccagatgtaattatca 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gatttgttaatgagaatgacacatgtaaactttacttttatctgccagatgtaattatca 624
Query: 425 tctcagaagcttactcttcctggcttgttccactgattgttctgcctcaaactcatctcc 484
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 625 tctcagaagcttactcttcctggcttgttccactgatttttctgcctcaaactcatctcc 684
Query: 485 aagataactgatctgatttctctcactttctcacttaattgttctgtgtggtctcacaca 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 aagataactgatctgatttctctcactttctcacttaattgttctgtgtggtctcacaca 744
Query: 545 aactatggaaatt-gttcttatcttctggtagattttcattctctggctagttctgtctt 603
||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 745 aactatggaaatttgttcttatcttctggtagattatcattctctggttagttctgtctt 804
Query: 604 cacctgctacctatctctgtctgttaacatgtaagttcagcatatctatctctgacccat 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 cacctgctacctatctctgtctgttaacatgtaagttcagcatatctatctctgacccat 864
Query: 664 tctatcaaacatttcctaaactg 686
|||||||||||||||||||||||
Sbjct: 865 tctatcaaacatttcctaaactg 887
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 686
Length of database: 1086
Length adjustment: 10
Effective length of query: 676
Effective length of database: 1076
Effective search space: 727376
Effective search space used: 727376
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no236_b13.g1 MSMg01no236_b13.g1 CHROMAT_FILE:
MSMg01no236_b13.g1 PHD_FILE: MSMg01no236_b13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:53:35 2005
(630 letters)
>mm_chr6_75474013_75475043
Length = 1031
Score = 799 bits (413), Expect = 0.0
Identities = 449/467 (96%), Gaps = 11/467 (2%)
Strand = Plus / Minus
Query: 175 acagaagctttgcagttttatgaggtcccatttgtcaattctcgatcttacagcacaagc 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1031 acagaagctttgcagttttatgaggtcccatttgtcaattctcgatcttacagcacaagc 972
Query: 235 cattgctgttctattcaggaattttttccccctgtggcacactttattttattaattaat 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 971 cattgctgttctattcaggaattttttccccctgtggcacactttattttattaattaat 912
Query: 295 atttgtccctacttgccattttctttctccttgaaattgaatactaatagaggatcagtg 354
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 911 atttgtccctacttgccattttctttctccttgaaattgcatactaatagaggatcagtg 852
Query: 355 tattctatat----------acatttaaatatcagtgaaaacataattccagctggttat 404
|||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 851 tattctatatacattagcaaacatttaaatatcagtgaaaacataattccagctggttat 792
Query: 405 taaaatatcacgtggaataaatcagatgagatttatgcaatgcaaaagttatggcgataa 464
|||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 791 taaaatatcacgtggaataaatcagatgagatttatgcaatgcaaaagctatggtgataa 732
Query: 465 actatttgttaattatattgttacactcttatcttttttccaaatcagattgtttctctc 524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 actatttgttaattatattgttacactcttatcttttttccaaatcagattgtttctctc 672
Query: 525 atcatagattcttctttattttataccataatattattgccattggcatatataccacat 584
|||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||
Sbjct: 671 atcatagattcttctttattttatacaataatattattgccattggcatatatactacat 612
Query: 585 atagcacattttttttt-agatcttagccattctagcgatatggaat 630
|||| |||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 611 atagtacattttttttttagatcttagccattctagtgatatggaat 565
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 630
Length of database: 1031
Length adjustment: 10
Effective length of query: 620
Effective length of database: 1021
Effective search space: 633020
Effective search space used: 633020
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
