Query= MSMg01no237_o08.b1 MSMg01no237_o08.b1 CHROMAT_FILE:
MSMg01no237_o08.b1 PHD_FILE: MSMg01no237_o08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:55:50 2005
(363 letters)
>mm_chr6_95711483_95712245
Length = 763
Score = 569 bits (294), Expect = e-166
Identities = 338/360 (93%), Gaps = 16/360 (4%)
Strand = Plus / Plus
Query: 5 ccacatctcgttaggcaatggggtgatgatgagccctttttccagtcgaggaggctgagt 64
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 205 ccacatctcgttaggcaatggggtgatgatgagccctttttcctgtcgaggaggctgagt 264
Query: 65 ttaaactctgcttttacaaacacactgcgtgaggctgtgtgactttctgatctcttctct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttaaactctgcttttacaaacacactgcgtgaggctgtgtgactttctgatctcttctct 324
Query: 125 gtggctcttcatttgacctgagaaatgtgtgcac-atgtgtgttccatgtgtgttcactg 183
|||||||||||||||||||||||| ||||| | ||||| | |||||||||
Sbjct: 325 gtggctcttcatttgacctgagaa-----tgcacga-gtgtgct-------tgttcactg 371
Query: 184 gtgttcccatctgtgcagatttgctcagactttcagatttaacaagcctcattgtatcaa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 gtgttcccatctgtgcagatttgctcagactttcagatttaacaagcctcattgtatcaa 431
Query: 244 ctttcaattttcccttcccatctgctgaatgtgacagataaactccttggaaatgttttt 303
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 cttttaattttcccttcccatctgctgaatgtgacagataaactccttggaaatgttttt 491
Query: 304 ttttttttatctatcatctttggttttatttaggattgcatggccacaggtactcatttc 363
||||||| | |||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 492 tttttttaaa--atcatctttgcttttatttaggattgcatggccacaggtactcatttc 549
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 363
Length of database: 763
Length adjustment: 9
Effective length of query: 354
Effective length of database: 754
Effective search space: 266916
Effective search space used: 266916
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no237_o08.g1 MSMg01no237_o08.g1 CHROMAT_FILE:
MSMg01no237_o08.g1 PHD_FILE: MSMg01no237_o08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:55:50 2005
(361 letters)
>mm_chr6_95807774_95808534
Length = 761
Score = 586 bits (303), Expect = e-172
Identities = 309/311 (99%)
Strand = Plus / Minus
Query: 1 gagaacatgtttgagaaacaggtcgcaagtcacaggtagatacctacccttggccctatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 gagaacatgtttgagaaacaggtcgcaagtcacaggtagatacctacccttggccctatg 252
Query: 61 gagtctctactctcataagggccagagacagccttctgttggacatttaaataaatctag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 gagtctctactctcataagggccagagacagccttctgttggacatttaaataaatctag 192
Query: 121 tagtttttattatagtctggtcagccccccgataattgagacagtcctattgatttattt 180
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 tagtttttattatagcctggtcagccccccgataattgagacagtcctattgatttattt 132
Query: 181 aatcagccttagcacaattactgggcgattacccctaaactatttttctatactagactg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 aatcagccttagcacaattactgggcgattacccctaaactatttttctatactagactg 72
Query: 241 cctatttcccagctgtgctacacaagttacttgtcaactgtcatcctgtatctgggacgg 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 71 cctatttcccagctgtgctacacaagttacttgtcaactgtcatcctgtatctgggccgg 12
Query: 301 atttgctccat 311
|||||||||||
Sbjct: 11 atttgctccat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 361
Length of database: 761
Length adjustment: 9
Effective length of query: 352
Effective length of database: 752
Effective search space: 264704
Effective search space used: 264704
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
