TCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCCAGAATCCG
CGGAATTCTGAACTGCTTAGCCGATTCCAAGTTTACTATTTAGCTGGAGG
CTTTCTTGTAAAGATCAAAGATACATCTTTGTCTTGAGAATTAATACAAA
AGGTACTGTCAGTCACTATTCAAAAAACTTCAAGAAATAATACAAAATAA
AACATATCTAAATGTCTTGGTAGGCACATGGTCTCTTTGGTCATTGTGCA
CTCTCAAACTTGGAAGCATTTCATGTTATTTGTAATAAATTCTTTCTGTC
TGCTATACTCTTCCATGACTTAATTGGAATTCATTCACCAGTGATCCCAA
GGACCACATAGCCAAAGGTGGTATAGAGAAGGTCCCAGCAACACATCTAG
GAATCCACAAAACATTCTTCCTATGGGCTTCCCTTACGATTGACACTGAG
AAGCTCATAAACATATCAGGGATTTTGATACAGTTCAAGACACATTGTCT
CCCCAAAATTGCTAGTTGGGGTTTGAGAAAATAGCAAAAAGAAACCCATT
CTCAGTAAGTCATCACACCTAGGAGCATTTACCTGACCTTTCTTTAAAGT
AGCTCCACGAATTCATGTGAGACATGCCCTTTCCACACTCAGAGGAAATG
AATGTAGTTTTCTTTGAAGGCCTAGGGATGCAGAGTAGCATTGGGAAAAA
ATAGGCAACTAAGAAAAACGTCTTT

TTCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXTCTCCGAATTCTATATACAAATTTATTTGCCCA
GCACTTAATGTACAACCAAATGGAGTTCTAAGGGCAACTTCACTTACATT
TCATGTTAAATCATGACTTTAAATCCTAACTGCTGACTTAGATGTAGGTC
CACTGTAATTAATATGTCACTGAATCATTAAAATAGTTTTATTTTGAATA
GGATTTATGACTAAAGTGAAGGTTTAGGGCAGTTGTGAAATATTTAATGA
TGGGAACAAGGTCTGATAAATGCATCAGTAAGTGATTCCATCATTGTGTG
AACAAGCCTGAGTGTACCTAAGCAGACCTATGTGGTATATATCATCCACT
GTCTTGATGCAGTTACAGTAAACATTTGAATGCATGCAGCTCCTTCCAGA
ATAATGTGGCATGCTTGTAAAATTATACTTTCTTTTTCATAAGTATGAGT
ATACTTTAAAAGAAGAATAGAAACTCCAGTTACCACATCATGCAGTAACA
CAGCTATTTATCAAGTATAATCCAATGCATAAAACTATGAATATACATAA
TTTTATAGGGCTAGCAGTTTGTCAGGAACATTCAGAGGGGCAACATAAAG
ATATGCATATTATATTTTGCTTTGCTAATATTGTGTCTATGATGTCTCAA
GAAAATAGCAACTCTCTAGTTCN

Query= MSMg01no261_c22.g1 MSMg01no261_c22.g1 CHROMAT_FILE:
MSMg01no261_c22.g1 PHD_FILE: MSMg01no261_c22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:57:31 2005
         (649 letters)



>mm_chr6_110344594_110345642
          Length = 1049

 Score = 1199 bits (620), Expect = 0.0
 Identities = 641/648 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   attctatatacaaatttatttgcccagcacttaatgtacaaccaaatggagttctaaggg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 848 attctatatacaaatttatttgcccagcacttaatgtacaaccaaatggagttctaaggg 789

                                                                       
Query: 61  caacttcacttacatttcatgttaaatcatgactttaaatcctaactgctgacttagatg 120
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 788 caacttcacttacatttcatgttaaatcatgactgtaaatcctaactgctgacttagatg 729

                                                                       
Query: 121 taggtccactgtaattaatatgtcactgaatcattaaaatagttttattttgaataggat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 taggtccactgtaattaatatgtcactgaatcattaaaatagttttattttgaataggat 669

                                                                       
Query: 181 ttatgactaaagtgaaggtttagggcagttgtgaaatatttaatgatgggaacaaggtct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 ttatgactaaagtgaaggtttagggcagttgtgaaatatttaatgatgggaacaaggtct 609

                                                                       
Query: 241 gataaatgcatcagtaagtgattccatcattgtgtgaacaagcctgagtgtacctaagca 300
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gataaatgtatcagtaagtgattccatcattgtgtgaacaagcctgagtgtacctaagca 549

                                                                       
Query: 301 gacctatgtggtatatatcatccactgtcttgatgcagttacagtaaacatttgaatgca 360
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cacctatgtggtatatatcatccactgtcttgatgcagttacagtaaacatttgaatgca 489

                                                                       
Query: 361 tgcagctccttccagaataatgtggcatgcttgtaaaattatactttctttttcataagt 420
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 488 tgcagctccttccagaataatgtggcatgcttgtaaaagtatactttctttttcataagt 429

                                                                       
Query: 421 atgagtatactttaaaagaagaatagaaactccagttaccacatcatgcagtaacacagc 480
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 428 atgagtatactttaaaagaagaatagaaactccagttgccacatcatgcagtaacacagc 369

                                                                       
Query: 481 tatttatcaagtataatccaatgcataaaactatgaatatacataattttatagggctag 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 tatttatcaagtataatccaatgcataaaactatgaatatacataattttatagggctag 309

                                                                       
Query: 541 cagtttgtcaggaacattcagaggggcaacataaagatatgcatattatattttgctttg 600
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 cagtttgtcaggcacattcagaggggcaacataaagatatgcatattatattttgctttg 249

                                                           
Query: 601 ctaatattgtgtctatgatgtctcaagaaaatagcaactctctagttc 648
           |||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 248 ctaatattgtgtctatgatgtctcaagagaatagcaactctctagttc 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1049
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1039
Effective search space:   663921
Effective search space used:   663921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)