Query= MSMg01no261_p03.b1 MSMg01no261_p03.b1 CHROMAT_FILE:
MSMg01no261_p03.b1 PHD_FILE: MSMg01no261_p03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:58:27 2005
(319 letters)
>mm_chr6_102726691_102727409
Length = 719
Score = 547 bits (283), Expect = e-160
Identities = 301/315 (95%), Gaps = 13/315 (4%)
Strand = Plus / Minus
Query: 5 gaattcaataggatgatttgttttcaattgattatttctttttattttgttttatagaca 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 gaattcaataggatgatttgttttcaattgattatttctttttattttgttttatagaca 576
Query: 65 ttctgtgcagtctctctataaatatgtgtctaatttgggtatccacatactgtgcttcac 124
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 ttctgtgcagtctctgtataaatatgtgtctaatttgggtatccacatactgtgct---- 520
Query: 125 tctgtggcctactcaaattcttaaggtttgtttgtcaatcccatgttttccctctaatat 184
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 ---------tactcaaattcttaaggtttgtttgtcaatcccatgttttccctctaatat 469
Query: 185 agacaaagtcaatattgacagttttttaaggccccatgccttctgtgttttgcctatgta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 agacaaagtcaatattgacagttttttaaggccccatgccttctgtgttttgcctatgta 409
Query: 245 ctttgcatagccaagtgaaaatattaatgcctagaagttttatcaattatcttttacatg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 ctttgcatagccaagtgaaaatattaatgcctagaagttttatcaattatcttttacatg 349
Query: 305 tagaactaagactga 319
|||||||||||||||
Sbjct: 348 tagaactaagactga 334
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no261_p03.g1 MSMg01no261_p03.g1 CHROMAT_FILE:
MSMg01no261_p03.g1 PHD_FILE: MSMg01no261_p03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:58:27 2005
(347 letters)
>mm_chr6_102538730_102539476
Length = 747
Score = 609 bits (315), Expect = e-179
Identities = 339/347 (97%)
Strand = Plus / Plus
Query: 1 agcctcctcaactttttatcttgatatcttaaatgaaggtaggagatgaacctcacactt 60
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 agcctcctcaactttttatcttgatatcttaaatgaaggtaggagatgaaattcacactt 260
Query: 61 cactttaactgccatgaacttgcacagagttgactggctgaaaaatagtttactcaataa 120
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 261 cactttaactgccatgaacttgcacagagttgaatggctgaaaaatagtttactcaataa 320
Query: 121 ctctcagtcagatggagctgtccacagcagtggcatttattagtttatgtatcttatttc 180
||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||
Sbjct: 321 ctctcagtcagatggagctatccacagcagtggcatttattggtttatgtatcttacttc 380
Query: 181 agatgtctttccaaacccaagaactattaagttattcactttgtgtcttcactgctttga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agatgtctttccaaacccaagaactattaagttattcactttgtgtcttcactgctttga 440
Query: 241 tcatagcttcggtgccaacacttattctttgtgttaaattaatgaaagataaataatatt 300
|||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 441 tcatagcttcggggccaacacttattctttctgttaaattaatgaaagataaataatatt 500
Query: 301 cagtagttatattcagttgcagatagatctaatgaatggatgaatat 347
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cagtagttatattcagttgcagatagatctaatgaatggatgaatat 547
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 347
Length of database: 747
Length adjustment: 9
Effective length of query: 338
Effective length of database: 738
Effective search space: 249444
Effective search space used: 249444
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
