Query= MSMg01no262_c23.b1 MSMg01no262_c23.b1 CHROMAT_FILE:
MSMg01no262_c23.b1 PHD_FILE: MSMg01no262_c23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:58:46 2005
(614 letters)
>mm_chr6_132974711_132975723
Length = 1013
Score = 1104 bits (571), Expect = 0.0
Identities = 600/610 (98%), Gaps = 2/610 (0%)
Strand = Plus / Minus
Query: 6 gaattcttcgtttagtcttcattgtattaaaaatttctgcatcaaatttataatgtattt 65
|||||||| |||||||| | |||||||| |||||||||||||||||||||||||||||||
Sbjct: 736 gaattctttgtttagtcataattgtatt-aaaatttctgcatcaaatttataatgtattt 678
Query: 66 tcccatattcccacaaaatatgcactcatttattgaaaaatagtgatagttaatatctat 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 tcccatattcccacaaaatatgcactcatttattgaaaaatagtgatagttaatatctat 618
Query: 126 ctgttttgccatttgaacatattttaatgagaaacagtagctctaaaataaagaaattaa 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 ctgttttgccatttgaacatattttaatgagaaacagtagctctaaaataaagaaattaa 558
Query: 186 aatctcttacaagacgttccaagaagacactaaatatttttatatttagcatgttttctt 245
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 aatctcttacaagaagttccaagaagacactaaatatttttatatttagcatgttttctt 498
Query: 246 ttctaaagtattttattaatattcttaaattttaagcttcttgtaaaggtttaaagctta 305
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 ttctaaagtagtttattaatattcttaaattttaagcttcttgtaaaggtttaaagctta 438
Query: 306 tggaataatattttgaccacacaaaacatacaaaatatacaaatataattgtcctttggt 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 tggaataatattttgaccacacaaaacatacaaaatatacaaatataattgtcctttggt 378
Query: 366 caagtaagccatttaagaattttgaaaggtcttcaattgctgtcagatgtgatagcacat 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 caagtaagccatttaagaattttgaaaggtcttcaattgctgtcagatgtgatagcacat 318
Query: 426 gcctgtatcccaacacttgaaagtcagaaatgataaaaacctatgattcaggccagctaa 485
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 317 gcctgtatcccaacacttgaaaggcagaaatgataaaaacctatgattcaggccagctaa 258
Query: 486 gttggacagtgaccttcattttacttaaggctacttagaatcagcataaacctaanaaat 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 257 gttggacagtgaccttcattttacttaaggctacttagaatcagcataaacctaaaaaat 198
Query: 546 aattaa-tatataaatgtacttatttgtgtgtgataatatcatcaattaatgtctgtacc 604
|||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 aattaaatatataactgtacttatttgtgtgtgataatatcatcaattaatgtctgtacc 138
Query: 605 attatttaag 614
||||||||||
Sbjct: 137 attatttaag 128
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 614
Length of database: 1013
Length adjustment: 10
Effective length of query: 604
Effective length of database: 1003
Effective search space: 605812
Effective search space used: 605812
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no262_c23.g1 MSMg01no262_c23.g1 CHROMAT_FILE:
MSMg01no262_c23.g1 PHD_FILE: MSMg01no262_c23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:58:46 2005
(690 letters)
>mm_chr6_132842183_132843273
Length = 1091
Score = 1290 bits (667), Expect = 0.0
Identities = 685/691 (99%), Gaps = 1/691 (0%)
Strand = Plus / Minus
Query: 1 catactgaaaattattggaagtgtgctctgtagaactgccaccattttctgtaaaacaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 891 catactgaaaattattggaagtgtgctctgtagaactgccaccattttctgtaaaacaat 832
Query: 61 acccaaacttctgaggtaactgctgaagatttgttaatatattcctttaaaacatattgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 831 acccaaacttctgaggtaactgctgaagatttgttaatatattcctttaaaacatattgt 772
Query: 121 tccttcaaaatatgagtgtaatttcatttaaaaattgcagaagtgatatctcacaaacaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771 tccttcaaaatatgagtgtaatttcatttaaaaattgcagaagtgatatctcacaaacaa 712
Query: 181 ctatcaagatttcttaatgattcatatgaaaatcttaaattgatagacataaatggaatt 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 711 ctatcaagatttcttaatgattcatatgaaaatcttaaattgatagacataaatagaatt 652
Query: 241 catccaaacacaaacaagcttgaattatcctaaaatggtctctagataatgctgaaggaa 300
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 651 catccaaacacaaacaagcttgaattattctaaaatggtctctagataatgctgaaggaa 592
Query: 301 atatcgtggttttgtatgccaacatacaaattttttcccctttggaacaatttaaaatat 360
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 591 atatcgtggttttgtatgccaacatacaaaatttttcccctttggaacaatttaaaatat 532
Query: 361 ctggataagttgagaaagttatattctaataaacatataaaaagcaaaaagagttgcact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 ctggataagttgagaaagttatattctaataaacatataaaaagcaaaaagagttgcact 472
Query: 421 agtgtatagaaattcttagatacaagggttcattagactcttcagaaaggtgctacacaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 agtgtatagaaattcttagatacaagggttcattagactcttcagaaaggtgctacacaa 412
Query: 481 agatatgtatatttttcaagtgttaatgtataaactactgtgtaataagcttgctgaaat 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 tgatatgtatatttttcaagtgttaatgtataaactactgtgtaataagcttgctgaaat 352
Query: 541 caagacttcttaagaggttaatactgagaataatacttattgatcactttatatacaggc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 caagacttcttaagaggttaatactgagaataatacttattgatcactttatatacaggc 292
Query: 601 atgtatactcattgaaacacataaagacacattaaatggtgctaaaatttcttttctcta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 atgtatactcattgaaacacataaagacacattaaatggtgctaaaatttcttttctcta 232
Query: 661 gtg-aaaaaaatccagcttcctattttactc 690
||| |||||||| ||||||||||||||||||
Sbjct: 231 gtgaaaaaaaattcagcttcctattttactc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 690
Length of database: 1091
Length adjustment: 10
Effective length of query: 680
Effective length of database: 1081
Effective search space: 735080
Effective search space used: 735080
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
