Query= MSMg01no262_e02.b1 MSMg01no262_e02.b1 CHROMAT_FILE:
MSMg01no262_e02.b1 PHD_FILE: MSMg01no262_e02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:58:51 2005
(588 letters)
>mm_chr6_126770441_126771428
Length = 988
Score = 1040 bits (538), Expect = 0.0
Identities = 574/586 (97%), Gaps = 3/586 (0%)
Strand = Plus / Plus
Query: 5 gaattctcttccctgccttctgccagtttta-aaggtagcaggacctgggagccatctta 63
|||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||
Sbjct: 204 gaattctcttccctgcctcctgccagttttacaaggtagcaggacctgggagccatctta 263
Query: 64 taagtgtcatcctctaagggcacagaagccccccccccccc-cgccccggcttctgatgg 122
|||||||||||||||||||||||||||||||||| |||||| | ||||||||||||||||
Sbjct: 264 taagtgtcatcctctaagggcacagaagccccccaccccccac-ccccggcttctgatgg 322
Query: 123 cggggaaggtactgccagatgcatacaaacactcccctgccacacgggagcagatctatt 182
|||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||
Sbjct: 323 cggggaaggtactgccagatgcatacaaacactcccctgctacacaggagcagatctatt 382
Query: 183 tgtcctctgaataaacatggacagccctgcacacaacccaggtggcttcacacacttgaa 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tgtcctctgaataaacatggacagccctgcacacaacccaggtggcttcacacacttgaa 442
Query: 243 aacgtcctcgcatcttcccagccttctgctttagtggtgtcgagtctagtcttctctctg 302
||||||||||||||| |||| || ||||||||||||||||| ||||||||||||||||||
Sbjct: 443 aacgtcctcgcatctccccaaccatctgctttagtggtgtccagtctagtcttctctctg 502
Query: 303 ccctctctcctttcccaaagggtcccctttccttccttgcagcatctttctaggtaaaag 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ccctctctcctttcccaaagggtcccctttccttccttgcagcatctttctaggtaaaag 562
Query: 363 ccttcacttactatgcctggacttgtttctcttaaatgctccccaccttcctaacccaca 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 ccttcacttactatgcctggacttgtttctcttaaatgctccccaccttcctaacccaca 622
Query: 423 actctcactctcttggacctcttccttcgcggggaagggttcctcaaatacactttgtgc 482
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 623 actctcactctcttggacctcttccttctcggggaagggttcctcaaatacactttgtgc 682
Query: 483 tccactacacctcccgtgcactccataaccttctaggatgtaaacctgacaggctttgtc 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 tccactacacctcccgtgcactccataaccttctaggatgtaaacctgacaggctttgtc 742
Query: 543 cattcatccttcatggtttcctgaaacaaaccacaggttttacagt 588
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 cattcatccttcatggtttcctgaaacaaaccacaggttttacagt 788
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 588
Length of database: 988
Length adjustment: 10
Effective length of query: 578
Effective length of database: 978
Effective search space: 565284
Effective search space used: 565284
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no262_e02.g1 MSMg01no262_e02.g1 CHROMAT_FILE:
MSMg01no262_e02.g1 PHD_FILE: MSMg01no262_e02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:58:51 2005
(632 letters)
>mm_chr6_126938882_126939913
Length = 1032
Score = 1147 bits (593), Expect = 0.0
Identities = 616/629 (97%), Gaps = 9/629 (1%)
Strand = Plus / Minus
Query: 1 agacagcaattgttggtgctcatgtatttgggcagaacatgtggtgtgagtgagaaagag 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 922 agacagcaattgttggtgttcatgtatttgggcagaacatgtggtgtgagtgagaaagag 863
Query: 61 attgagacataggcacatgccatttaaatgcacccccacacaccccacacaccccacaca 120
||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 862 attgagacataggcacatgccatttaaatgcac---------ccccacacaccccacaca 812
Query: 121 ccccacacaccatgacctactctttccacctaggacccatttcctaaagtttcttgaacc 180
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 811 ccccacacaccatgacctactctttccacctaggacccacttcctaaagtttcttgaacc 752
Query: 181 ttcctccccaaatagtgccacttgcttcgtgccaaactggcgagggtattccacattcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 ttcctccccaaatagtgccacttgcttcgtgccaaactggcgagggtattccacattcag 692
Query: 241 cgacaacacacagatccacaggggttaacattcttaagggtctatgatgacaagtcatgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 cgacaacacacagatccacaggggttaacattcttaagggtctatgatgacaagtcatgg 632
Query: 301 ttgcagggcttgttttttgccctcagaaactgtgccactaatcacagtatgtgacctctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 ttgcagggcttgttttttgccctcagaaactgtgccactaatcacagtatgtgacctctc 572
Query: 361 aagaaagcacacatttgcacctcatcctgcccaggtgacagttcacttactattgctatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 aagaaagcacacatttgcacctcatcctgcccaggtgacagttcacttactattgctatg 512
Query: 421 ggcttcccacccactagaacagggcaaaataaaacctagatgtttactgcaggactgaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 ggcttcccacccactagaacagggcaaaataaaacctagatgtttactgcaggactgaat 452
Query: 481 gcttaggggtctctctcttccacttaagattggtgtgctcactctccaaggcctgggatc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 gcttaggggtctctctcttccacttaagattggtgtgctcactctccaaggcctgggatc 392
Query: 541 ttggggaccacagtcaaacttgtctgcctcacttggatgatgcaggaggggtttttgttt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 ttggggaccacagtcaaacttgtctgcctcacttggatgatgcaggaggggtttttgttt 332
Query: 601 gctatcatttgtttttgcttttgtttttt 629
| ||||||||||||||| |||||||||||
Sbjct: 331 gttatcatttgtttttgtttttgtttttt 303
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1032
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1022
Effective search space: 635684
Effective search space used: 635684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
