Query= MSMg01no264_p19.b1 MSMg01no264_p19.b1 CHROMAT_FILE:
MSMg01no264_p19.b1 PHD_FILE: MSMg01no264_p19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:02:19 2005
(315 letters)
>mm_chr6_121309877_121310591
Length = 715
Score = 596 bits (308), Expect = e-175
Identities = 311/312 (99%)
Strand = Plus / Plus
Query: 4 ggaattcacagacacacatagatgaatacacataggaactcacagacacacatagatgca 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcacagacacacatagatgaatacacataggaactcacagacacacatagatgca 263
Query: 64 cactcataggagctcacagacacacatagatgcacactcataggaactcacagacacaca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cactcataggagctcacagacacacatagatgcacactcataggaactcacagacacaca 323
Query: 124 tagatgcacacacataggaactcacagacacacatagatacacacgcatagatgcgtaca 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 324 tagatgcacacacataggaactcacagacacacatagatacacacgcatagatgcataca 383
Query: 184 catagaagctcacagacacacatagatgctaacagcacacagaccctcacaaaccctcat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 catagaagctcacagacacacatagatgctaacagcacacagaccctcacaaaccctcat 443
Query: 244 ggcatttacaggcatgtcaagatgccacagatgtccccacacactcctgggtgcacatgg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ggcatttacaggcatgtcaagatgccacagatgtccccacacactcctgggtgcacatgg 503
Query: 304 ggctaaggagaa 315
||||||||||||
Sbjct: 504 ggctaaggagaa 515
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 48
Number of extensions: 7
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 715
Length adjustment: 9
Effective length of query: 306
Effective length of database: 706
Effective search space: 216036
Effective search space used: 216036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no264_p19.g1 MSMg01no264_p19.g1 CHROMAT_FILE:
MSMg01no264_p19.g1 PHD_FILE: MSMg01no264_p19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:02:19 2005
(287 letters)
>mm_chr6_121467159_121467845
Length = 687
Score = 487 bits (252), Expect = e-142
Identities = 277/290 (95%), Gaps = 10/290 (3%)
Strand = Plus / Minus
Query: 1 cttatggaatccagccttgcttctacatgggagaacattccagcgaaccgttgcaaagct 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 485 cttatggaatccagccttgcttctacatgggagaacattccagcgaacagttgcaaagct 426
Query: 61 gtcaggttgctattggctgatttccagccagagatgtgccagtaaaagaccttgcatagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 425 gtcaggttgctattggctgatttccagccagagatgtgccagtaaaagaccttgcctagc 366
Query: 121 atgggagacaaaggtgtccataaattctcatatatatatatatatgagcacacttgtcca 180
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 365 atgggagacaaaggtgtccataaattctc----atatatatatatgagcacacttgtcca 310
Query: 181 gacactcgtgggggacgttgtgcctgtggggacagagact-----agcttctgccaacga 235
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 309 gacactcgtgggggacgttgtgcctgtggggacagagacttgctcagcttctgccaacga 250
Query: 236 atcctcttctactgtccctggaggggggggccttcccaagcacccctttc 285
|||||||||||| ||||||||| |||||||||||||||||||||||||||
Sbjct: 249 atcctcttctacagtccctgga-gggggggccttcccaagcacccctttc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
