Query= MSMg01no265_b22.b1 MSMg01no265_b22.b1 CHROMAT_FILE:
MSMg01no265_b22.b1 PHD_FILE: MSMg01no265_b22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:02:31 2005
(318 letters)
>mm_chr6_27762970_27763687
Length = 718
Score = 592 bits (306), Expect = e-173
Identities = 312/314 (99%)
Strand = Plus / Plus
Query: 5 gaattcaaggcccattgtttcttacctatgattttttctctctgacgcatctaagtgata 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaaggcccattgtttcttacctatgattttttctctctgacgcatctaagtgata 264
Query: 65 ttcatgttctcatctataacacagacctttgagccctggccctcacatagagtgcattct 124
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttcatgttcccatctataacacagacctttgagccctggccctcacatagagtgcattct 324
Query: 125 tctgtggcaagtcaaagaagcaacccttatcgttttgtggggaatatttaaaaatgaaaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tctgtggcaagtcaaagaagcaacccttatcgttttgtggggaatatttaaaaatgaaaa 384
Query: 185 caactctaatttattctgatacctaggactaaattgaggttcagtgaaatataatgataa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 caactctaatttattctgatacctaggactaaattgaggttcagtgaaatataatgataa 444
Query: 245 caggccttgacatggacctgaaattctacaattctaggtagcagagggtatgtgtattta 304
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 445 caggccttgacatggacctgaaattctacaattctagggagcagagggtatgtgtattta 504
Query: 305 tgtgggagtatgtg 318
||||||||||||||
Sbjct: 505 tgtgggagtatgtg 518
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space: 219081
Effective search space used: 219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no265_b22.g1 MSMg01no265_b22.g1 CHROMAT_FILE:
MSMg01no265_b22.g1 PHD_FILE: MSMg01no265_b22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:02:31 2005
(223 letters)
>mm_chr6_27920055_27920677
Length = 623
Score = 416 bits (215), Expect = e-121
Identities = 218/219 (99%), Gaps = 1/219 (0%)
Strand = Plus / Minus
Query: 1 cactcaaacatggtcgggcagatcagaggtggtggctctggttgtgtcgtcagcctacag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 cactcaaacatggtcgggcagatcagaggtggtggctctggttgtgtcgtcagcctacag 339
Query: 61 caacacggcatgagattcacactcatcacctttctgccccagcttggcctgattaacatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 caacacggcatgagattcacactcatcacctttctgccccagcttggcctgattaacatc 279
Query: 121 cattcttgataacttcctggaagcttttatcaaattttattccctcctccttccagttat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 cattcttgataacttcctggaagcttttatcaaattttattccctcctccttccagttat 219
Query: 181 attgagggtatcttttaggtgtgtgtgtgtg-tgtgtgt 218
||||||||||||||||||||||||||||||| |||||||
Sbjct: 218 attgagggtatcttttaggtgtgtgtgtgtgatgtgtgt 180
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 223
Length of database: 623
Length adjustment: 9
Effective length of query: 214
Effective length of database: 614
Effective search space: 131396
Effective search space used: 131396
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
