Query= MSMg01no265_n15.b1 MSMg01no265_n15.b1 CHROMAT_FILE:
MSMg01no265_n15.b1 PHD_FILE: MSMg01no265_n15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:03:29 2005
(313 letters)
>mm_chr6_76774208_76774920
Length = 713
Score = 567 bits (293), Expect = e-166
Identities = 305/309 (98%)
Strand = Plus / Minus
Query: 5 gaattcctcaatgtgagtagatactattggcaagagatggttccctcagtacatccaaga 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 gaattcctcaatgtgagtagatactattggcaagagatggttccctcagtacatccaaga 454
Query: 65 atcatcttccatgcgaaccaacatcttacttcttatcgtcttcatagaaaatctgcctgt 124
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 atcatcttccatgggaaccaacatcttacttcttatcgtcttcatagaaaatctgcctgt 394
Query: 125 tgtactctcatcattcttccagggctcggtataattcttccagtattatacaagaagtta 184
||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 393 tgtactctcattattcttccagggctcggtataattcgtccagtattatacaagaagtta 334
Query: 185 tgaattaacacatgtaggggaactgttctgtggatacatggtaaaggatggacttctata 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 tgaattaacacatgtaggggaactgttctgtggatacatggtaaaggatggacttctata 274
Query: 245 cctcaaactgcttattcatttagcaaatattttggggtatttctcatgttttagggactc 304
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 cctcaaactgctcattcatttagcaaatattttggggtatttctcatgttttagggactc 214
Query: 305 tagaatact 313
|||||||||
Sbjct: 213 tagaatact 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 713
Length adjustment: 9
Effective length of query: 304
Effective length of database: 704
Effective search space: 214016
Effective search space used: 214016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no265_n15.g1 MSMg01no265_n15.g1 CHROMAT_FILE:
MSMg01no265_n15.g1 PHD_FILE: MSMg01no265_n15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:03:29 2005
(289 letters)
>mm_chr6_76623929_76624618
Length = 690
Score = 526 bits (272), Expect = e-154
Identities = 284/288 (98%), Gaps = 1/288 (0%)
Strand = Plus / Plus
Query: 1 atattcctgacttcctgggtctgagttaaaagcctctgcatgaactttcaaatcaaactg 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 atattcctgacttcctgggtctgagttaaaagcctctgcatgaacttttaaatcaaactg 260
Query: 61 cttactgacacaatgtagttgggagtttctacatgaaaccttacttctaaatcccacagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 261 cttactgacacaatgtagttgggagtttctacatgaaaccttacttctaaatcccactgg 320
Query: 121 g-ttgtaccttagtaaatttatttattctggcactgacctcttttattatgaaagaaatc 179
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 321 ggttgtaccttagtaaatttatttattctggcactgacctcttttattatgaaagaaacc 380
Query: 180 agtagagttcttattatcctcagttaaactttcttagttatgatttccatgtccatattc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agtagagttcttattatcctcagttaaactttcttagttatgatttccatgtccatattc 440
Query: 240 aaggttaagtgcagaaaggagatatttctctgagaattcagtatagta 287
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaggttaagtgcagaaaggagatatttctctgagaattcagtatagta 488
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 690
Length adjustment: 9
Effective length of query: 280
Effective length of database: 681
Effective search space: 190680
Effective search space used: 190680
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
