Query= MSMg01no266_d05.b1 MSMg01no266_d05.b1 CHROMAT_FILE:
MSMg01no266_d05.b1 PHD_FILE: MSMg01no266_d05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:03:55 2005
(322 letters)
>mm_chr6_83301679_83302400
Length = 722
Score = 584 bits (302), Expect = e-171
Identities = 314/320 (98%), Gaps = 4/320 (1%)
Strand = Plus / Plus
Query: 5 gaattcctggctggctgtttgtcaggactgtgctaggggcatggcttctgcgtagaagca 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctggctggctgtttgtcaggactgtgctaggggcatggcttctgcgtagaagca 264
Query: 65 gaggggacctgggtgccttatccagacacacccagagaggaacacaggtgcaagcagcta 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gaggggacctgggtgccttatccagacacacccagagaggaacacaggtgcaagcagcta 324
Query: 125 gataagagccagctctacattgccactactaggagagtcccctgacttccctgaaagcac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gataagagccagctctacattgccactactaggagagtcccctgacttccctgaaagcac 384
Query: 185 agttgcatgggttgggaggatgttgacaagtctcttttattgtgctagggacatagctca 244
|||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||
Sbjct: 385 agttgcatgggttgggaggacgttgacaagtctcttttattgtgctggggacatagctca 444
Query: 245 gttggtagagtgcttgcctagcatgtacattccctgatgttgtgtcttattaaaaaaaaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gttggtagagtgcttgcctagcatgtacattccctgatgttgtgtcttattaaaaaaaaa 504
Query: 305 aa----gaaggaaaaaagtg 320
|| ||||||||||||||
Sbjct: 505 aaaaaagaaggaaaaaagtg 524
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 722
Length adjustment: 9
Effective length of query: 313
Effective length of database: 713
Effective search space: 223169
Effective search space used: 223169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no266_d05.g1 MSMg01no266_d05.g1 CHROMAT_FILE:
MSMg01no266_d05.g1 PHD_FILE: MSMg01no266_d05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:03:55 2005
(287 letters)
>mm_chr6_83411224_83411912
Length = 689
Score = 528 bits (273), Expect = e-154
Identities = 285/289 (98%), Gaps = 2/289 (0%)
Strand = Plus / Minus
Query: 1 acctttcttcaatagccctattgacgtcggagtcagcttatagagcagg-cctgctactc 59
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 489 acctttcttcaatagccctattgacgtcggagtcagcttatagagcaggtcctgctactc 430
Query: 60 tataatcaaatgactttggacccattactcctctaagccccagaaactttctctctaaaa 119
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 tgtaatcaaatgactttggacccattactcctctaagccccagaaactttctctctaaaa 370
Query: 120 caataaaaagtaccatgctgtaccagaaggaaagtaccattttcacaatttctgtggggg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 caataaaaagtaccatgctgtaccagaaggaaagtaccattttcacaatttctgtggggg 310
Query: 180 -atccatctacacacaacaatgtgtgtgggagtggtctgtgttgtggggaagctctgtgc 238
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 309 aatccatctacacacaacaatgtgtgtgggagtggtctgtgtagtggggaagctctgtgc 250
Query: 239 aaataccaaatgctgattagagggttttaacaaatacacgagtaagggc 287
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 aaataccaaatgctgattagagggttttaacaaatacacgagtaagggc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 689
Length adjustment: 9
Effective length of query: 278
Effective length of database: 680
Effective search space: 189040
Effective search space used: 189040
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
