Query= MSMg01no266_k12.b1 MSMg01no266_k12.b1 CHROMAT_FILE:
MSMg01no266_k12.b1 PHD_FILE: MSMg01no266_k12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:04:30 2005
(345 letters)
>mm_chr6_121178979_121179721
Length = 743
Score = 648 bits (335), Expect = 0.0
Identities = 341/343 (99%), Gaps = 2/343 (0%)
Strand = Plus / Minus
Query: 1 aatgtggagttagggaagcacacatagccacacttttgtccagaggaacctggacactgc 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 541 aatgtggagttagggaagcacacatagccacacttttgtccagaggaacctgga-actgc 483
Query: 61 atttgataaattagagaagaaatgaacttcactgatattgtgttagtcatggattcttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 atttgataaattagagaagaaatgaacttcactgatattgtgttagtcatggattcttct 423
Query: 121 aagtcctggtataaaatacaacaaaataaaagtattttttcttgagaattaagttttctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 aagtcctggtataaaatacaacaaaataaaagtattttttcttgagaattaagttttctt 363
Query: 181 aaggtatctctagcggaggtgtcatgacccaagtgagctaaacaagaaacttcccgaaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 aaggtatctctagcggaggtgtcatgacccaagtgagctaaacaagaaacttcccgaaac 303
Query: 241 gtcactgcatagctgtccttccaatcctggacttagctggcatttgcagagcctgcttta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gtcactgcatagctgtccttccaatcctggacttagctggcatttgcagagcctgcttta 243
Query: 301 cctctgagtatgtgtgcatgtgtggtgtgggtgtnggtggtgg 343
|||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 242 cctctgagtatgtgtgcatgtgtggtgtgggtgt-ggtggtgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 345
Length of database: 743
Length adjustment: 9
Effective length of query: 336
Effective length of database: 734
Effective search space: 246624
Effective search space used: 246624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no266_k12.g1 MSMg01no266_k12.g1 CHROMAT_FILE:
MSMg01no266_k12.g1 PHD_FILE: MSMg01no266_k12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:04:30 2005
(282 letters)
>mm_chr6_121078916_121079597
Length = 682
Score = 514 bits (266), Expect = e-150
Identities = 278/282 (98%)
Strand = Plus / Plus
Query: 1 agtcttgaaaaggattaagactataatttctaggtcatattgtttgctttttttcctttg 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 201 agtcttgaaaaggattaagactataatttctaggtcaaattgtttgctttttttcctttg 260
Query: 61 ttctaatgcctaccatattcttgccttctctttctttcactctcttctttcctcaagatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttctaatgcctaccatattcttgccttctctttctttcactctcttctttcctcaagatc 320
Query: 121 taatatagaccaggctagcctcaaacttgctctatagctgtgtggccttcaacctgtgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taatatagaccaggctagcctcaaacttgctctatagctgtgtggccttcaacctgtgat 380
Query: 181 cctttgtcaccacctcacaaatgctggggttccaggcgtgaatcaccgtgctccatccac 240
||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 381 cctttgtgaccacctcccaaatgctggggttccaggcgtgaatcaccgtgttccatccac 440
Query: 241 ctctttccagcagccatgcttcttgcggctgaagagtgggac 282
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctctttccagcagccatgcttcttgcggctgaagagtgggac 482
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 682
Length adjustment: 9
Effective length of query: 273
Effective length of database: 673
Effective search space: 183729
Effective search space used: 183729
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
