TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCAAAGCTTTCCATTTCAGCTAAGCTGGCTAGGATGAGCCTGTCTCC
ACACGTACTCCTTTCCCATCATTGCCAGGGTCACACACATGTGCAGTCGT
GACAGTGGGCGTGGGGGATCTGAACTCTGTTTACAGTTCTTACTCAGCCC
CTAAGGAAAGCTTAAATTTTTTAAACTTTACTTTCTGGTTTCTGTTTCAA
AAGTAAGAAATATAGCATGCAGAAAATGTAGGGTGCTATGTAAAAATATT
TTTAATCACTTGTATTCTCAGGTAGTGACTTAATCAAACTAAAGGTGTCT
GTTTACCAATTCTAGGAAGAAGAGGATTCTGAGCAAGAGGAACAGATCTC
AGTCCCACTCAGTGCCTTCTCTTCACTCCTTGGTCCTGATGCAAGCAACC
ATTATTTGCCTCTCACGGTACGGCTTCTGTCACTGTCTATCCGACATCTT
CTCAGCAGCTGGAGTTCAGATATAAAGTGAATCAAATGGCACTGCTCTCC
CATCAAGCTGGAATGTAGCCCAGAAAAATCACAGCATGTACAAGGCCTCA
ACTTCTACCTCCTTTGCCTCCTCCGGTTCACTGCCAAAGCCCTTGGGACT
TTCCTGCAGGCTCAGCCCTGGCTGGCTCCTCCTACACAGCTCTCAGATAC
AGAATCACCACATGGGGAGGTCTGCCCTGGGCATCAAGCT

TCGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXAGCTGCTGTGGAGGTTGTCTCAC
ATGGGAATGGAGAATCAAACCTGGATCCCCTACAAAAGCCGAATGTATTC
TTAACGTCTGAGCCATCTTTCAACTCCACAACCACAAAATTGCTAATCAG
CCCTGTAACCCTTAAATAGGGAGTTTATCTCTCTCTCTCTCTATATATAT
ATATATATTTATATATCCATCTATCTATCTGTCCGTCCACCCATCCATCC
ATCCATCCATCCATCCATCCATCCATCCACCCATTTTGTACTTCAGTTCA
CATCTACAGAATCATTATTTCCTGCAGGTGGCACTAGTTTTCTGGGTTGT
AACATAGTTTCTAGACAAGACTGACTGTCAGGTCAGCGCAAATGAGAACA
TGAGGTCCCTTGATCAGAAGTTAGAAAGAGTACCCACAGCTCAGCATAGT
TAAGCACAGAGCAACAGAGGCAGAACCCCATGAAATGGCTTAAGACACAC
AGACCTTGAAGTTCACCGTGCTTCCATGTGGCTCCTTGAAGCCTAAGGAC
TTTTCTACATCCTGTTTCCTTCTGCAGCTGGGCACTATCCAGGGCGAGGC
TCAGGCACAACACTGGCTCTCAGATGGTGAATACTGCACTGGGCCCACTC
ATTCCTCATGTGACATCTTCTTAGGCTCAAGGCCTCCTGTG

Query= MSMg01no266_n03.b1 MSMg01no266_n03.b1 CHROMAT_FILE:
MSMg01no266_n03.b1 PHD_FILE: MSMg01no266_n03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:04:42 2005
         (677 letters)



>mm_chr6_99782787_99783864
          Length = 1078

 Score = 1207 bits (624), Expect = 0.0
 Identities = 660/674 (97%), Gaps = 5/674 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcaaagcttt---ccatttcagctaagctggctaggatgagcctgtctccacacgt 61
           ||||||||||||     |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaaagct--aagccatttcagctaagctggctaggatgagcctgtctccacacgt 262

                                                                       
Query: 62  actcctttcccatcattgccagggtcacacacatgtgcagtcgtgacagtgggcgtgggg 121
           ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct: 263 actcctttcccatcattgctagggtcacacacatgtgcagtcgtgacagtggacgtgggg 322

                                                                       
Query: 122 gatctgaactctgtttacagttcttactcagcccctaaggaaagcttaaattttttaaac 181
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 323 gatctgaactctgtttacagttcttactcagcccctaaggaaagcttaatttttttaaac 382

                                                                       
Query: 182 tttactttctggtttctgtttcaaaagtaagaaatatagcatgcagaaaatgtagggtgc 241
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 383 tttactttctggtttctgtttcaaaagtaagaaatatagcatgcagaaaatgtaggatgc 442

                                                                       
Query: 242 tatgtaaaaatatttttaatcacttgtattctcaggtagtgacttaatcaaactaaaggt 301
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tatgtaaaaatatttttaatcacttgtattctcaggtagtgacttaatcaaactaaaggt 502

                                                                       
Query: 302 gtctgtttaccaattctaggaagaagaggattctgagcaagaggaacagatctcagtccc 361
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 gtctgtttaccaattctaggaagaagaggattctgagcaagaggaacagatctcagtccc 562

                                                                       
Query: 362 actcagtgccttctcttcactccttggtcctgatgcaagcaaccattatttgcctctcac 421
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 563 actcagtgccttctcttcactccttggtcctgatgcaagcaaccattatttgtctctcac 622

                                                                       
Query: 422 ggtacggcttctgtcactgtctatccgacatcttctcagcagctggagttcagatataaa 481
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 623 ggtacggcttctgtcactgtctatctgacatcttctcagcagctggagttcagatataaa 682

                                                                       
Query: 482 gtgaatcaaatggcactgctctcccatcaagctggaatgtagcccagaaaaatcacagca 541
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 gcgaatcaaatggcactgctctcccatcaagctggaatgtagcccagaaaaatcacagca 742

                                                                       
Query: 542 tgtacaaggcctcaacttctacctcctttgcctcctccggttcactgccaaagcccttgg 601
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 743 tgtacaaggcctcaacttctacctcctttgcctcctctggttcactgccaaagcccttgg 802

                                                                       
Query: 602 gactttcctgcaggctcagccctggctggctcctcctacacagctctcagatacagaatc 661
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 803 gactttcctgcaggctcagccctggctggctcctcctacacagctctcagaaacagaatc 862

                         
Query: 662 accacatggggagg 675
           ||||||||||||||
Sbjct: 863 accacatggggagg 876


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 677
Length of database: 1078
Length adjustment: 10
Effective length of query: 667
Effective length of database: 1068
Effective search space:   712356
Effective search space used:   712356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)