TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTTTGTTTAGCTCTGTACCTCATTTTTTAAAGGGTTATTTGGTTCTC
TGAAGTCTATCTTCATGAGTTCTTTGTATATATTGGATATTAGCCATCTA
TTGGATACAGGATTGATAAAGATCTTTTCCCAATCTGTTGGTTGCCATTT
TGTCCTATAGTGTCTCTAGGCCTTACAGAAACTTTTCAATTTTATGGGGT
ACCATTTGTTGATTGTTGATCTTAGAGCGTGAGCCACTGTTTTTCTAGTC
CAGAAATTTCCGCCTGTGCCCATGTGTTCCAGGCTCTTCCCCACTTTCTC
TTCTATTAGATTTGGTGTATCTGGTTCCACCCCCCACCCCCTTTATCCAG
TTGGACCTTAGCTTTGTGCAAAGGGGATAAAAATGCATTGATTTACATTC
TTGTACATGCTGACTGCACTTAAACCAGCATGATTTGTTGTAAATGCTGT
CTTTTTTCTACTGGATTGTTTTAGCTTCTTTGTCAAAGATCAAGTGACTA
TAGGTGTGTGGGTTTCTAGGTCTTCACTTCTGTTCTATTGATCTACATGC
CTGTCCCTGAAATATACCCTGCAGTTTTTACCTTAATTTCTCTGCCATAC
AGCTTGAACCAAGGGACGTTGAATTTTCCCTAAGAATTCCCCCCTATTCT
TTTTCTATCATTTTCATCTTCTTGGACCTCACTCTTCCCAACCTAATTTT
CATCTTCTCT

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACCTGATAAGTTTCAGGTTA
GCGTCAGCTTCTGAGTATTAAATTGTTTAGAGAAAAAGCTATAGGGTAAT
AATCCCCTATCAAAATTGGCAGTGTAAATTTACAGGTATAAAGTTTTACA
AGTATCCCAGGCATGCACCTTTCCTTGGTTGTAACATTTTAATAATGAAC
TAAAAGTTTTACTGCAGAAGTAAAAAAATTCTGCATTGTTGCAAATTGCA
AAATATAAAGAAAATGAGATCTTTTCCTTTGGAAATCTTGATGTGTTTTC
CATAAGGCCATATTAATAGCACACTCATTCAGTTTTTTATTTTATAGTAT
GTATTGAATAATGTCCTGAGAGGTCAACACTCAAATTTGTGTTTGATCAT
GAGGCTTCTTCTTCCCTCTTCTGGTCTAATCCTATCTATGTATATGATTC
TTGCATCCCATATTAGATGTAGTAGAATGAAGGCAGCTCAAGTTAATGGT
TTGTTTTGAAGACTGTCAACAAAAGTTAGTGAAAACTTACATTTATGGTA
TATCTAGAATGAACTAGACTAGTGTAGAACTGANAGTAACAGCATTGACT
TAGACTGTTTTCATTGAATATTGCTGCTGGACTATAGATTAGTTTGCTTT
AAGACTGGTTATATCCCAGAGCTGGGTCTCTAGTTGG

Query= MSMg01no267_m21.g1 MSMg01no267_m21.g1 CHROMAT_FILE:
MSMg01no267_m21.g1 PHD_FILE: MSMg01no267_m21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:05:57 2005
         (578 letters)



>mm_chr6_11389148_11390124
          Length = 977

 Score = 1065 bits (551), Expect = 0.0
 Identities = 571/578 (98%), Gaps = 1/578 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tttagagaaaaagctatagggtaataatcccctatcaaaattggcagtgtaaatttacag 60
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 777 tttagagaaaaagctatagggtaataatcccctttcaaaattggcagtgtaaatttacag 718

                                                                       
Query: 61  gtataaagttttacaagtatcccaggcatgcacctttccttggttgtaacattttaataa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 gtataaagttttacaagtatcccaggcatgcacctttccttggttgtaacattttaataa 658

                                                                       
Query: 121 tgaactaaaagttttactgcagaagtaaaaaaattctgcattgttgcaaattgcaaaata 180
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 657 tgaactaaaagttttactgcagaagt-aaaaaattctgcattgttgcaaattgcaaaata 599

                                                                       
Query: 181 taaagaaaatgagatcttttcctttggaaatcttgatgtgttttccataaggccatatta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 taaagaaaatgagatcttttcctttggaaatcttgatgtgttttccataaggccatatta 539

                                                                       
Query: 241 atagcacactcattcagttttttattttatagtatgtattgaataatgtcctgagaggtc 300
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 aaagcacactcattcagttttttattttatagtatgtattgaataatgtcctgagaggtc 479

                                                                       
Query: 301 aacactcaaatttgtgtttgatcatgaggcttcttcttccctcttctggtctaatcctat 360
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 aactctcaaatttgtgtttgatcatgaggcttcttcttccctcttctggtctaatcctat 419

                                                                       
Query: 361 ctatgtatatgattcttgcatcccatattagatgtagtagaatgaaggcagctcaagtta 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 ctatgtatatgattcttgcatcccatattagatgtagtagaatgaaggcagctcaagtta 359

                                                                       
Query: 421 atggtttgttttgaagactgtcaacaaaagttagtgaaaacttacatttatggtatatct 480
           |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 358 atggtttgttttgaagactgtcaataaaagttagtgaaaatttacatttatggtatatct 299

                                                                       
Query: 481 agaatgaactagactagtgtagaactganagtaacagcattgacttagactgttttcatt 540
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 298 agaatgaactagactagtgtagaactgaaagtaacagcattgacttagactgttttcatt 239

                                                 
Query: 541 gaatattgctgctggactatagattagtttgctttaag 578
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 238 gaatattgctgctggactatagattagtttgctttaag 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 578
Length of database: 977
Length adjustment: 10
Effective length of query: 568
Effective length of database: 967
Effective search space:   549256
Effective search space used:   549256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)