Query= MSMg01no268_c09.b1 MSMg01no268_c09.b1 CHROMAT_FILE:
MSMg01no268_c09.b1 PHD_FILE: MSMg01no268_c09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:06:23 2005
(317 letters)
>mm_chr6_129334149_129334865
Length = 717
Score = 520 bits (269), Expect = e-152
Identities = 304/323 (94%), Gaps = 16/323 (4%)
Strand = Plus / Plus
Query: 5 gaattccaagattagacatctaaat-aaaaatgttcacaagtatataaaatataaac--- 60
||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||
Sbjct: 193 gaattccaagattagacatctaaatgaaaaat-ttcacaagtatataaaatataaacact 251
Query: 61 ---------cagaagttgaataataaatgcagcagctttggcctcaaaattcttttgggg 111
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 gtattatgccagaagttgaataataaatgcagcagctttggcctcaaaattcttttgggg 311
Query: 112 gctaatgataattaacactctgactatgaaaaggttataatacacttcttgggacgtagc 171
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 312 gctaatgataattaacactctgactatgaaaaggttataatacacttcttgggacgtggc 371
Query: 172 aatctgcccaggctggcgtggagatttcctttctgtctcttacccttggaactgcaagag 231
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 aatgtgcccaggctggcgtggagatttcctttctgtctcttacccttggaactgcaagag 431
Query: 232 ctaccagcctgagaacagacaattgcactttggtaaaatgtgcctcttgattcttaaaag 291
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 432 ctaccagcctgagaacagacaattgcgctttggtaaaatgtgcctcttgattcttaaaag 491
Query: 292 ttgggctatagg-gttgatgagg 313
||||||||| || ||||||||||
Sbjct: 492 ttgggctat-ggagttgatgagg 513
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 717
Length adjustment: 9
Effective length of query: 308
Effective length of database: 708
Effective search space: 218064
Effective search space used: 218064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no268_c09.g1 MSMg01no268_c09.g1 CHROMAT_FILE:
MSMg01no268_c09.g1 PHD_FILE: MSMg01no268_c09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:06:23 2005
(287 letters)
>mm_chr6_129484561_129485247
Length = 687
Score = 543 bits (281), Expect = e-159
Identities = 284/285 (99%)
Strand = Plus / Minus
Query: 1 tcctccaccagtcagcaatgtcaaacctgtgggtggtgacttctctgccctgtgcttcag 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 485 tcctccaccagtcagcaatgtcaaacctgtgggtggtgacttcactgccctgtgcttcag 426
Query: 61 agcatgtctctagcacagggattttaatgctgtgacgagagtcggtgagtacacagacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 agcatgtctctagcacagggattttaatgctgtgacgagagtcggtgagtacacagacaa 366
Query: 121 ggcattcagagtgctgccagctgtgtggtccatgtgtaattttaaaatattaagtggggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ggcattcagagtgctgccagctgtgtggtccatgtgtaattttaaaatattaagtggggc 306
Query: 181 tgacaaactgagagaaattttgaaagcaatcctccacagtcctgagctcaaggaaataac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 tgacaaactgagagaaattttgaaagcaatcctccacagtcctgagctcaaggaaataac 246
Query: 241 atgtgaaggactgtgtagtaggaaggcatgactggagtgtgccca 285
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 atgtgaaggactgtgtagtaggaaggcatgactggagtgtgccca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
