Query= MSMg01no268_c16.b1 MSMg01no268_c16.b1 CHROMAT_FILE:
MSMg01no268_c16.b1 PHD_FILE: MSMg01no268_c16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:06:24 2005
(584 letters)
>mm_chr6_142983112_142984096
Length = 985
Score = 907 bits (469), Expect = 0.0
Identities = 553/581 (95%), Gaps = 1/581 (0%)
Strand = Plus / Minus
Query: 5 gaattcagtgtctgtaattacatttctttcaggaggtgtctgaggagatgataggacccc 64
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 603 gaattcagtgtctgtaattacatttctttcaggaggtgtctgaggagatgataggatccc 544
Query: 65 ccatcccagagcccagacagcgctgcagactcctaaggtctcagtcggaaagctctgatg 124
|||||||||| ||||||||||||| |||||| ||||| || ||||||||||| |||||||
Sbjct: 543 ccatcccagaacccagacagcgctccagacttctaagatcacagtcggaaagttctgatg 484
Query: 125 aagttacagacttcgacctttcacacgggaaaaagggtgcttttgttttagaggtactgc 184
|||||||||| || || ||||||||||||||||||| ||||||||||||||||||| | |
Sbjct: 483 aagttacagagttagatctttcacacgggaaaaaggatgcttttgttttagaggtaatac 424
Query: 185 tgcactgaaatgatgttgtgaatgtccgagaa-gtaaacattttatactcgggttctgca 243
|||| |||||| ||||||| |||||| ||||| ||||| |||||||| | |||||||| |
Sbjct: 423 tgcattgaaataatgttgtaaatgtctgagaaggtaaatattttataattgggttctgaa 364
Query: 244 ctgattgacagcttgtactacgttacagctaccagggaaatggtagacatttcacgtatt 303
|||||||||| ||||||||| |||||||||||||||||||| |||||||||||| |||||
Sbjct: 363 ctgattgacaacttgtactatgttacagctaccagggaaattgtagacatttcatgtatt 304
Query: 304 tgaccttagcagcacttggtaactgttgctgtaatgtaaacagccctgaagccacttgga 363
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 303 tgaccttagcagcacttggtaactgttgctgtaatataaacagccctgaagccacttgga 244
Query: 364 taaaataatagttaaaatgcaagctgagcaaccttcatagtgatggtttgaataggcttg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 taaaataatagttaaaatgcaagctgagcaaccttcatagtgatggtttgaataggcttg 184
Query: 424 gcttctgtagactctcgtgtttgaatgcttagcctgtagggagtggcactaataggaaga 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 gcttctgtagactctcgtgtttgaatgcttagcctgtagggagtggcactaataggaaga 124
Query: 484 tagccttgttggaggaagtgttgccactgtggactttgaagtctctatactcaagctccg 543
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 tagccttgttggaggaagtgttgccactgtggactttgaagtctctatactcaagctcca 64
Query: 544 cccagtgaggaagagagtctccgcatggctgcctttggatc 584
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 cccagtgaggaagagagtctccgcatggctgcctttggatc 23
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 584
Length of database: 985
Length adjustment: 10
Effective length of query: 574
Effective length of database: 975
Effective search space: 559650
Effective search space used: 559650
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no268_c16.g1 MSMg01no268_c16.g1 CHROMAT_FILE:
MSMg01no268_c16.g1 PHD_FILE: MSMg01no268_c16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:06:24 2005
(292 letters)
>mm_chr6_142931175_142931866
Length = 692
Score = 542 bits (280), Expect = e-158
Identities = 286/288 (99%)
Strand = Plus / Plus
Query: 1 tgggaacgactgatagatgcatttggttctaggaaagaggctgggctctgttcccttctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgggaacgactgatagatgcatttggttctaggaaagaggctgggctctgttcccttctg 260
Query: 61 aaaggcactaagaatacatttaggttcacccatgagggtgcatagacaatttctaacact 120
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 261 aaaggcactaagaatacatttaggttcacccatgcgggtgcatagacaatttctaacact 320
Query: 121 aagaagggattgagcagaagattaaattccatccaaactgagaagggaccagtgatggaa 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagaagggattgagcagaagattaaattccatccaaactgagaagggaccagtgatggag 380
Query: 181 actgctctggcaaccatgcaaatggggaggatatgaactggaattgagaatgtctctatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 actgctctggcaaccatgcaaatggggaggatatgaactggaattgagaatgtctctatg 440
Query: 241 tctcttgtggccgagcctatgtgagagaaacagcagcagatgtccctc 288
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctcttgtggccgagcctatgtgagagaaacagcagcagatgtccctc 488
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 692
Length adjustment: 9
Effective length of query: 283
Effective length of database: 683
Effective search space: 193289
Effective search space used: 193289
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
