Query= MSMg01no268_g09.b1 MSMg01no268_g09.b1 CHROMAT_FILE:
MSMg01no268_g09.b1 PHD_FILE: MSMg01no268_g09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:06:40 2005
(313 letters)
>mm_chr6_51652519_51653230
Length = 712
Score = 569 bits (294), Expect = e-166
Identities = 306/310 (98%), Gaps = 1/310 (0%)
Strand = Plus / Minus
Query: 4 ggaattcatggagtgatacggtaggtgacggcagacaaagcggagagtgccagggagagc 63
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 512 ggaattcatggagtgatacggtaggtgactgcagacaaagcggagagtgccagggagagc 453
Query: 64 ccgtaggtgactctggagtttggccagagagagggaagccattacttctaacaataacaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 ccgtaggtgactctggagtttggccagagagagggaagccattacttctaacaataacaa 393
Query: 124 acaacaacaaaaaaaacgccgctgaaacagcatcactcatgtactctcaacctgttcttg 183
|||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 392 acaacaac-aaaaaaacgccgctgaaacggcatcactcatgtactctcaacctgttcttg 334
Query: 184 tgaaacagactgacagcccctttaatatgaaataaatcaggcaggagaagaagtgtctgg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 333 tgaaacagactgacagcccctttaatatgaaataaatcaggcaggagaagaagagtctgg 274
Query: 244 aagaacatacagattgagggctgactgacagaacacccatctgcctttgtagcagctaac 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 aagaacatacagattgagggctgactgacagaacacccatctgcctttgtagcagctaac 214
Query: 304 ttgaaaggat 313
||||||||||
Sbjct: 213 ttgaaaggat 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 712
Length adjustment: 9
Effective length of query: 304
Effective length of database: 703
Effective search space: 213712
Effective search space used: 213712
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no268_g09.g1 MSMg01no268_g09.g1 CHROMAT_FILE:
MSMg01no268_g09.g1 PHD_FILE: MSMg01no268_g09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:06:40 2005
(280 letters)
>mm_chr6_51528695_51529374
Length = 680
Score = 491 bits (254), Expect = e-143
Identities = 260/262 (99%), Gaps = 1/262 (0%)
Strand = Plus / Plus
Query: 19 gccctaaacaggtggcaggcaatgctcctgcctcagcttcttcaagtccttgggttatag 78
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 gccc-aaacaggtggcaggcaatgctcctgcctcagcttcttcaagtccttgggttatag 278
Query: 79 atgcgagccaccacactcagccgagatggcttgtgttttgaatctagcagacccagctgt 138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 atgcgagccaccacactcagccgagatggcttgtgttttgaatctagcagacccagctgt 338
Query: 139 ttgtcagctttgtggtacccagagggaccgcctgctcattcggggtttacccagaggaga 198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 ttgtcagctttgtggtacccagagggaccgcctgctcattcggggtttacccagaggaga 398
Query: 199 ggcatcgtggcttagcctaggctggggacttaggcttgtttgtttcccaagtttgtctca 258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 ggcatcgtggcttagcctaggctggggacttaggcttgtttgtttcccaagtttgtctca 458
Query: 259 gggctgctatggggaaacagac 280
||||||||| ||||||||||||
Sbjct: 459 gggctgctacggggaaacagac 480
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 280
Length of database: 680
Length adjustment: 9
Effective length of query: 271
Effective length of database: 671
Effective search space: 181841
Effective search space used: 181841
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
