Query= MSMg01no269_d23.b1 MSMg01no269_d23.b1 CHROMAT_FILE:
MSMg01no269_d23.b1 PHD_FILE: MSMg01no269_d23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:07:40 2005
(453 letters)
>mm_chr6_105858014_105858866
Length = 853
Score = 708 bits (366), Expect = 0.0
Identities = 369/370 (99%)
Strand = Plus / Minus
Query: 1 tacacagaatactctagaaagctgatcaatgatcagtaattcagaggttgtagagagatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 tacacagaatactctagaaagctgatcaatgatcagtaattcagaggttgtagagagatt 311
Query: 61 gtaatgatcctgatctagactcaaactattgttagaacttttaataagcatttattgtgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gtaatgatcctgatctagactcaaactattgttagaacttttaataagcatttattgtgc 251
Query: 121 acttttgtgtttgactattacataaatcattggggatggatgcacaggcccccctatctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 acttttgtgtttgactattacataaatcattggggatggatgcacaggcccccctatctt 191
Query: 181 ccatcaacccaaaggtaaagaatgtcactagattacacccgaggcctataactgattttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 ccatcaacccaaaggtaaagaatgtcactagattacacccgaggcctataactgattttc 131
Query: 241 cctatttgctataaactgtctactaggtgtatttaacaaaatatgtgaaaagtgtttaca 300
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 ccaatttgctataaactgtctactaggtgtatttaacaaaatatgtgaaaagtgtttaca 71
Query: 301 tttgtgactttctttgttctgttactagaaaaactagggcaaactaaatcttcattcctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 tttgtgactttctttgttctgttactagaaaaactagggcaaactaaatcttcattcctg 11
Query: 361 ggcaatgata 370
||||||||||
Sbjct: 10 ggcaatgata 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 453
Length of database: 853
Length adjustment: 10
Effective length of query: 443
Effective length of database: 843
Effective search space: 373449
Effective search space used: 373449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no269_d23.g1 MSMg01no269_d23.g1 CHROMAT_FILE:
MSMg01no269_d23.g1 PHD_FILE: MSMg01no269_d23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:07:40 2005
(239 letters)
>mm_chr6_105722625_105723263
Length = 639
Score = 400 bits (207), Expect = e-116
Identities = 232/241 (96%), Gaps = 2/241 (0%)
Strand = Plus / Plus
Query: 1 gcattgag--tccttcctcaggtgtctcaaagtatgtcaaattgacacttaaagctagct 58
|||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 199 gcattgagagtccttcctcaggtgtctcaaagtatttcaaattgacagttaaagctagct 258
Query: 59 agaacaattcaccaatttgtatccaacttttagattctttctttcttcacttaatgtcta 118
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 agaacaattcaccaatttgtatccaacttttagattctttctttcttcacttaatgtctg 318
Query: 119 aatgagtattgtagatattttctgcatatagaaacatttgtgatccctgcctgtcctgag 178
||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||
Sbjct: 319 aatgagtattgtagatattttgtgcatatagaaacatttgtgatccctgcctgacctgag 378
Query: 179 cctgaatattcatcatactttctaagttgtcacataaaactgactacgccatatttctca 238
||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||
Sbjct: 379 cctgaatattcatcatactttctaagtagtcacataaaactgactatgccatatttctca 438
Query: 239 t 239
|
Sbjct: 439 t 439
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
