XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
CTTGTGGCTAAATATAAAAGCTGCATTTAAAAATTCCCAAAGGAGGATGT
TTGTTTTTAATTTGAACTCTTGAGAATAAGCATTTGAAACAGTTATGGTT
TCTGCTTTCACCTTGTGTAATCAAGCTGACTCTTAGCATTTTCTTGCTTT
GCCAGACAGATACTCAGAGGTTGCTGTTTTTCTTTCCTCCTTTTGCAACT
CAGCTTTGAAGTACTTCAATTGTAAGCTTATTTTAATTGCAAAGATCATG
CATGGGGGAATCTCAGGGCTAAGCAGTAGTTAAATAACAAGCTAATGGAA
GTCAATCCAGCATTCTGTATTTGCATTTTTGCATTTACATTTTAAAATTC
CAAGTTAGATGTGATCAAAGCTGCTCCTCATCGCGATTTTCTATATTTAG
CAGCAGTGAAACACTGCTTAGCCTTCTGCACAACATTCTTGCCCTTGCTT
CTTCTCCCTTCCTGACCTTGCTGGTCCTGCCTTTTCCCCTGGTTATCCCC
ATCACCAATCCCCAACTATCCATGTCTCTATTAAAATGAAGCCCTCACCT
CAACCTGCTTTCCTTTTGGCAAAGTCTTCTTCCAGGAGTGGAGGTGAGCA
CCTCCATGGGCAGAAGCTTAGGAATGATTTCTGACTTTAGCTCTGGTTAA
GCAACTTCTTCTGGNTCCCATGATCATGGATGAAT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXCTAAGAGGAAAACTCATAGCTCTGAGTGCCTC
CAAAAAGAAACTAGAGAGAGCACACATTAGCATCTTCACAACACACCTAA
AACGTCTAGAAGAAAAGGAAGCAAATTCACCCAAGAGGAGTAGAAGGCAG
GAAATAAGCAAACTCAGGAGGGAGATCAGCCAAGTGGAAACAAGAAGAAC
TGTTCAAAACATCAACCAATCAAGGAGCTGGTTCTTTGAGAAAATCAACA
AGATAGATAAACCCTTAGCCAGACTCACTAGAGGGCACAGGGAAAGCATC
CTAATTAACAAAATCAGAAATGAAAAGGGAGACATAACAACAGATCCTGA
AGAAATCCAAAACACCATCAGATCCTTCTACAAAAGGCTATACTCAACAA
AACTAGAAAACCTGGATGAAATGGACAAGTTTCTCGACAGATACCACGTA
CCAAAGCTAAATCAAGATCAGGTTAATGATCTCAGCAGTCCTATATCCCC
TAAAGAAATAGAAGCAGTCATTAATAGTCTCCCAGCCAAAAAAAGCCCAG
GACCAGACGGGTTTAGTGCAGAGTTCTATCAGACCTTCAAAGAAGACCTA
ATTCCAGTTCTTCACAAACTATTCCACAAAATAGAAATGGAAGGTACTCT
AACCAACTCATTCTATGAAGCCACAATTACTCTGATACCTAAACCACAAA
AAGACCCAACAAAGATAGA

Query= MSMg01no270_h19.b1 MSMg01no270_h19.b1 CHROMAT_FILE:
MSMg01no270_h19.b1 PHD_FILE: MSMg01no270_h19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:09:09 2005
         (695 letters)



>mm_chr6_59316969_59318069
          Length = 1101

 Score = 1237 bits (640), Expect = 0.0
 Identities = 681/699 (97%), Gaps = 8/699 (1%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattccttgtggctaaatataaaagctgcatttaaaaattcccaaaggaggatgtttg 63
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 204 ggaattccttgtggctaaatataaaagctgcatttaaaa-ttcccaaaggaggatgtttg 262

                                                                       
Query: 64  tttttaatttgaactcttgagaataagcatttgaaacagttatggtttctgctttcacct 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tttttaatttgaactcttgagaataagcatttgaaacagttatggtttctgctttcacct 322

                                                                       
Query: 124 tgtgtaatcaagctgactcttagcattttcttgctttgccagacagatactcagaggttg 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tgtgtaatcaagctgactcttagcattttcttgctttgccagacagatactcagaggttg 382

                                                                       
Query: 184 ctgtttttctttcctccttttgcaactcagctttgaagtacttcaattgtaagcttattt 243
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gtgtttttctttcctccttttgcaactcagctttgaagtacttcaattgtaagcttattt 442

                                                                       
Query: 244 taattgcaaagatcatgcatgggggaatctcagggctaagcagtagttaaataacaagct 303
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 443 taattgcaaagatcatgcatggggaaatctcagggctaagcagtagttaaataacaagct 502

                                                                       
Query: 304 aatggaagtcaatccagcattctgtatttgcatttttgcatttacattttaaaattccaa 363
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 aatggaagtcaatccagcagtctgtatttgcatttttgcatttacattttaaaattccaa 562

                                                                       
Query: 364 gttagatgtgatcaaagctgctcctcatcgcgattttct-------atatttagcagcag 416
           |||||||||||||||||||||||||||||||||||||||       ||||||||||||||
Sbjct: 563 gttagatgtgatcaaagctgctcctcatcgcgattttctgcaggttatatttagcagcag 622

                                                                       
Query: 417 tgaaacactgcttagccttctgcacaacattcttgcccttgcttcttctcccttcctgac 476
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 tgaagcactgcttagccttctgcacaacattcttgcccttgcttcttctcccttcctgac 682

                                                                       
Query: 477 cttgctggtcctgccttttcccctggttatccccatcaccaatccccaactatccatgtc 536
           ||||||||||||||| |||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 683 cttgctggtcctgccctttcccctggctacccccatcaccaatccccaactatccatgtc 742

                                                                       
Query: 537 tctattaaaatgaagccctcacctcaacctgctttccttttggcaaagtcttcttccagg 596
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||
Sbjct: 743 tctattaaaatgaagccctcacctcagcctgctttccttttggcaaagtcttctttcagg 802

                                                                       
Query: 597 agtggaggtgagcacctccatgggcagaagcttaggaatgatttctgactttagctctgg 656
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 agtggaggtgagcacctccatgggcagaagcttaggaatgatttctgactttagctctgg 862

                                                  
Query: 657 ttaagcaacttcttctggntcccatgatcatggatgaat 695
           |||||||||||||||||| ||||||||||||||||||||
Sbjct: 863 ttaagcaacttcttctggttcccatgatcatggatgaat 901


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 695
Length of database: 1101
Length adjustment: 10
Effective length of query: 685
Effective length of database: 1091
Effective search space:   747335
Effective search space used:   747335
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)