ACTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTTTGTTTACCTCTGAGCCCCATTTTTAAATGGGTTTATTTGAT
TTTCTGGAGTCAACCTTCTTGAGTTCTTTATATATATTGGATATTAGTCC
CCTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATTTGTTGGTGGCC
TTTTGTCTTATTGATGGTGTCTTTTGCCTTACATAAGCTTTGCAGTTTCA
TGAGGTCCCATTTGTCAATTCTCGATCTTACAGCACAAAGCATTGCTGTT
CTATTCAGGAATTTTTTCCCCAGTGACAATATCTTCGAGGCTTTTCCCCA
TTTTCTCCTCTATATGTTTCACTGTCTCTGGTTTTATGTGGAGCTCCTTG
ATCCACTTAGACTTGAGCTTCGTACAAGGAGATAAGAATGGATCAATCCC
CATTCTACTACATGGTATCAGCCAGTTGTACCAGCACCATTTGTTGAAAA
TGCTGTCCTTTTTCCACTGGATAGTTTTAGGTCCCTTGTCGAAGATCAAG
TGACCATAGGTGTGTGGGTTCATTTCTGGGTCTTCAATTCTATTCCATTG
GTCTACTTGTCTGTCACTATACCAGTAACATGCAGTTTTTATCACAATTG
CTCTGTAGTAAAGCTTTAGGTCAGGCATGGTGATTCCACCAGAGGTTCTT
TATCCTTGA

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTTTGTTCAGCTCTGAGCCCCATTTT
TTTAATGGGGTTATTTGATTTTCTGGAGTCCACCTTCTTGAGTTCTTTAT
ATACATTGGATATTAGTCCCCTATCTGATTTGGGATAGGTAAAGATCCTT
TCCCAATCTGTTGGTGGCCTTTTTGTCTTATTGACGGTGTCTTTTGCCTT
GCAGAAGCTTTGCAATTTTATGAGGTCCCATTTATCGACTCTTGATCTTA
CAGCACAAGCCATTGCTGTTCTATTCAGGAATTTTCCCCCTGTACCCATA
TCTTCGTGGCTTTTCCCTACTTTCTCCTCTATAAGTTTCAGTGTCTCTGT
AAATATGTAAATAGCACATTGCAAAAAATACTTTTAAGTTTTTAAATACT
TATTTATGTACTTTTTTTAGTTATGTGTACAGTCCATGTGTATGTGTGCA
GTCCTTGTGTGTGTGTGTGTGTGTGTGTAGGACAGATGTGCAATGACACA
TGTGCGGAGGTCAGCGAACAACTGGTGGATATGTGTTCTCCCTTCCACCA
CTTGGTTTCCACACATGAAACTCTGGTCACCAGGCTTGGCAGCAAAGGTC
TTTAGCACTGACCCCTTTCATTAGTGCTGTGGAAACCATATTTAAATCTT
ATTTCAAGTTTCCCTAAGATC

Query= MSMg01no274_c01.g1 MSMg01no274_c01.g1 CHROMAT_FILE:
MSMg01no274_c01.g1 PHD_FILE: MSMg01no274_c01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:13:37 2005
         (646 letters)



>mm_chr6_14149221_14150266
          Length = 1046

 Score = 1123 bits (581), Expect = 0.0
 Identities = 636/667 (95%), Gaps = 23/667 (3%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttgttcagctctgagccccatttttttaatggggttatttgattttctggagtccacct 60
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||
Sbjct: 202 tttgttcagctctgagcccca-ttttttaatggggttatttgattttctggagtcgacct 260

                                                                       
Query: 61  tcttgagttctttatatacattggatattagtcccctatctgatttgggataggtaaaga 120
           |||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||
Sbjct: 261 tcttaagttctttatatatattggatattagtcccctatccgatttgggataggtaaaga 320

                                                                       
Query: 121 tcctttcccaatctgttggtggcctttttgtcttattgacggtgtcttttgccttgcaga 180
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 321 tcctttcccaatctgttggtggcctttttgtcttattgacggtgtcttttgctttgcaga 380

                                                                       
Query: 181 agctttgcaattttatgaggtcccatttatcgactcttgatcttacagcacaagccattg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agctttgcaattttatgaggtcccatttatcgactcttgatcttacagcacaagccattg 440

                                                                       
Query: 241 ctgttctattcaggaattttccccctgtacccatatcttcgtggcttttccctactttct 300
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 441 ctgttctattcaggaattttccccctgtacccatatcttcgtggcttttctctactttct 500

                                                                       
Query: 301 cctctataagtttcagtgtctctgtaaatatgtaaatagcacattgcaaaaaatactttt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cctctataagtttcagtgtctctgtaaatatgtaaatagcacattgcaaaaaatactttt 560

                                                                       
Query: 361 aagtttttaaatacttatttatgtactttttttagttatgtgtacagtccatgtgtatgt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 561 aagtttttaaatacttatttatgtactttttttagttatgtgtacagtccacgtgtatgt 620

                                                                       
Query: 421 gtgcagtccttgtgtgtg--tgtgtgtgtgtgtgtag-------------------gaca 459
           ||||||||||||||||||  ||||||||||||||| |                   ||||
Sbjct: 621 gtgcagtccttgtgtgtgaatgtgtgtgtgtgtgt-gtgtgtgtgtgtgtgtgtgtgaca 679

                                                                       
Query: 460 gatgtgcaatgacacatgtgcggaggtcagcgaacaactggtggatatgtgttctccctt 519
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 680 gatgtgcaatgacacatgtgcggaggccagcgaacaactggtggatatgtgttctccctt 739

                                                                       
Query: 520 ccaccacttggtttccacacatgaaactctggtcaccaggcttggcagcaaaggtcttta 579
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 ccaccacttggtttccacacatgaaactctggtcaccaggcttggcagcaaaggtcttta 799

                                                                       
Query: 580 gcactgacccctttcattagtgctgtggaaaccatatttaaatcttatttcaagtttccc 639
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 gcactgacccctttcattagtgctgtggaaaccatatttaaatcttatttcaagtttccc 859

                  
Query: 640 taagatc 646
           |||||||
Sbjct: 860 taagatc 866


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 646
Length of database: 1046
Length adjustment: 10
Effective length of query: 636
Effective length of database: 1036
Effective search space:   658896
Effective search space used:   658896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)