TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCCAGGCTAGCTGCAGCTAGGTGAGACTTTGTCTCAAAACTAAACTAAAC
TAAACTAAAATCTCTTTCCAGTTACTGTTTGTGGTCAACCTCCTGGGGGA
GGGGGCGGGAGGGAAACGGGAGGAAAACCACATAATAGCTCACCGAACAA
GTTCTAGTGTTTCGATGTCACCTCTGCCACCAGGTTCCCTATAAAACATA
ATTTTTAAACTTGAATAAACAATAAAAAGAGATGTTGAGAAGTTCACAGG
GTTTGGCAGTGAGATTATGCTCATGGCAGCTGTGGCAGAACACTCAGAGA
GCATTGTACCTCTCCTCCCTGATGTCCGCGGGCTTTAGCCCTCCACTCAA
GGTCGAGCATAAAACAGGCATCTGTGATTGTGTGCTCAGAAAGGAGCAGA
GACAGGGGGATGACTTGTGGGTCACTTTCAGAGATCCATTACCTCAATAC
CATTTGGCAAGATCCATGCAGAGAGAGAATATCACAGTAATGTCTGCTTA
TAGTAACACATTAAAAAAAAAGATTTATTATATGTAAGTATACTGTAGCA
GGTTTTCTTTCTGAGATATGTGACCTCATGTGAATATTACAGATCCTAAA
CCCATCCCCTGCCTTGCAAATTCTGTGATTTCGTTTTTCCTTAGAGTATT
ATTCCATGTTTTTAGATATAGTAATTTTTATTACN

GACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXCCAACTTTTAGTGTACTTAACTCTTTAG
AAATAAATGACTTGTCTCGGGAGATGGCCCATTTGCTTAAGTTCTTAACA
CAGAAGTATAAGTTTCGAATCCTCAGCACCTGTATAAAAATCTGGCCACA
GAGGTGTGATCCTACTTCTGAGGAGGCTGAGATGGGTCCCTGGATCTCAC
TGGCCTCCCAGCCTAGCTGAATAAGTAAGACCAGGTTCAGTGAGAGACCC
TATCTCAAAGTTAATTGGACTGGACTGAGAAAGGCACCTGTTGACCTGTA
GTCTGTTTTTTCACACCCACCTCTAAAATATGCACACAAGACACAATACA
TACACACACATCACATTGCCACTGAAAGGAGAAAAAAGAGATATATGAGA
TATGTTATTTAACAGAATAGTTCTACAGGTGCTTTTGTGAAGGCATCTTT
CTCCTGCAGGGGGTCACTCTTCAGGCATTTGCCAAGTTTACATTCCATAA
ACATTACTTTAGCATTTTTTTTTCTTTAGCTCTTAAGAGGCAAGCTCTCA
CCTCAGGGGCTTCAGCTAACTGAGGCTTTGAGAAACATGAATTAGCTGGC
CATTTACTGATATGTTCCTGATATGCATGCAGTCACAGCAAAGGCCCTTT
TCTTACTTGGAGTTCCCAAGGCTAGGCATGTGACCA

Query= MSMg01no274_e09.b1 MSMg01no274_e09.b1 CHROMAT_FILE:
MSMg01no274_e09.b1 PHD_FILE: MSMg01no274_e09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:13:47 2005
         (651 letters)



>mm_chr6_99448033_99449084
          Length = 1052

 Score = 1141 bits (590), Expect = 0.0
 Identities = 637/654 (97%), Gaps = 5/654 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   taggtgagactttgtctcaaaactaaactaaactaaactaaaatctctttccagttactg 60
           ||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||
Sbjct: 201 taggtgagactttgtctcaaaactaaactaaactaaactaaaacctctttgaagttactg 260

                                                                       
Query: 61  tttgtggtcaacctcctgggggagggggcgggagggaaacgggaggaaaaccacataata 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttgtggtcaacctcctgggggagggggcgggagggaaacgggaggaaaaccacataata 320

                                                                       
Query: 121 gctcaccgaacaagttctagtgtttcgatgtcacctctgccaccaggttccctataaaac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gctcaccgaacaagttctagtgtttcgatgtcacctctgccaccaggttccctataaaac 380

                                                                       
Query: 181 ataatttttaaacttgaataaacaataaaaagagatgttgagaagttcacagggtttggc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ataatttttaaacttgaataaacaataaaaagagatgttgagaagttcacagggtttggc 440

                                                                       
Query: 241 agtgagattatgctcatggcagctgtggcagaacactcagagagcattgtacctctcctc 300
           |||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 441 agtgagaaaatgctcatggcagctgtggcagaacactcagagagcattgaacctctcctc 500

                                                                       
Query: 301 cctgatgtccgcgggctttagccctccactcaaggtcgagcataaaacaggcatctgtga 360
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 501 cctgatgtccgagggctttagccctccactcaaggtcgagcataaaacaggcatccgtga 560

                                                                       
Query: 361 ttgtgtgctcagaaaggagcagagacagggggatgacttgtgggtcactttcagagatcc 420
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttgtgtgctcagaaaggaacagagacagggggatgacttgtgggtcactttcagagatcc 620

                                                                       
Query: 421 attacctcaataccatttggcaagatccatgcagagagagaatatcacagtaatgtctgc 480
           | |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||
Sbjct: 621 actacctcaataccatttggcaagatccatgcagagagagaatatca--gtaatgtctgc 678

                                                                       
Query: 481 ttatagtaacacattaaaaaaaaa--gatttattatatgtaagtatactgtagcaggttt 538
           ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||
Sbjct: 679 ttatagtaacacattaaaaaaaaaaagatttattatatgtaagtatactgtagcaggttt 738

                                                                       
Query: 539 tctttctgagat-atgtgacctcatgtgaatattacagatcctaaacccatcccctgcct 597
           |||||||||||| |||||||||||| |||||||||||||||| |||||||||||||||||
Sbjct: 739 tctttctgagatgatgtgacctcatatgaatattacagatcccaaacccatcccctgcct 798

                                                                 
Query: 598 tgcaaattctgtgatttcgtttttccttagagtattattccatgtttttagata 651
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 tgcaaattctgtgatttcgtttttccttagagtattattccatgtttttagata 852


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1052
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1042
Effective search space:   667922
Effective search space used:   667922
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)