Query= MSMg01no277_a17.b1 MSMg01no277_a17.b1 CHROMAT_FILE:
MSMg01no277_a17.b1 PHD_FILE: MSMg01no277_a17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:17:06 2005
(365 letters)
>mm_chr6_19592177_19592941
Length = 765
Score = 681 bits (352), Expect = 0.0
Identities = 361/364 (99%)
Strand = Plus / Minus
Query: 2 ccaccctttctcagaaagctaatagttgccaggaacacttttctactttgttgatgttga 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ccaccctttctcagaaagctaatagttgccaggaacacttttctactttgttgatgttga 506
Query: 62 atcaaagatataagtaatctttatagcctaaaggctttatttagttagtttattcacaat 121
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 atcaaaaatataagtaatctttatagcctaaaggctttatttagttagtttattcacaat 446
Query: 122 ttgaaaccagactttgtagatgacttatataagaatctaagaagagaagcatcacaaaca 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttgaaaccagactttgtagatgacttatataagaatctaagaagagaagcatcacaaaca 386
Query: 182 atttgcatgctctctcttcaaggttctttgattaataagaaacatcataaactatcatac 241
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 atttgcaagctctctcttcaaggttctttgattaataagaaacatcataaactatcatac 326
Query: 242 ataaatctgtacatatgaatctttaaagtcttggctgagcaaataatgctaaaatcttat 301
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 325 ataaatctgtacatatgaatctttaaagtcttggctgaacaaataatgctaaaatcttat 266
Query: 302 atttattctaactctgatttcatttgttagacccaattcccttttgttgctatgtcaatg 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atttattctaactctgatttcatttgttagacccaattcccttttgttgctatgtcaatg 206
Query: 362 tgca 365
||||
Sbjct: 205 tgca 202
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 365
Length of database: 765
Length adjustment: 9
Effective length of query: 356
Effective length of database: 756
Effective search space: 269136
Effective search space used: 269136
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no277_a17.g1 MSMg01no277_a17.g1 CHROMAT_FILE:
MSMg01no277_a17.g1 PHD_FILE: MSMg01no277_a17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:17:06 2005
(344 letters)
>mm_chr6_19439550_19440299
Length = 750
Score = 634 bits (328), Expect = 0.0
Identities = 342/350 (97%), Gaps = 6/350 (1%)
Strand = Plus / Plus
Query: 1 actggtatacaaaggcatcaaatttaataattagtagttatttaaaattataccccaatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actggtatacaaaggcatcaaatttaataattagtagttatttaaaattataccccaatt 260
Query: 61 atggaagtacttaaaaattacggatcaggtataaaacttgataaactggttacagtgtga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atggaagtacttaaaaattacggatcaggtataaaacttgataaactggttacagtgtga 320
Query: 121 tgaaacacttcaattgttccaaaaggttattaagactatgaaatattgttggagaagata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgaaacacttcaattgttccaaaaggttattaagactatgaaatattgttggagaagata 380
Query: 181 ttcaataacatatctcacaaagtaatatgtccttatttattaacataattttgactatat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttcaataacatatctcacaaagtaatatgtccttatttattaacataattttgactatat 440
Query: 241 acatatatatatat------ttcacacacacttcttcatatacttatatattcctatttt 294
|||||||||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct: 441 acatatatatatatatatatttcacacacacttcttcatacacttatatattcctatttt 500
Query: 295 ttatttctatgtacattcatttttaaaataaatgacaaaaatatatacag 344
||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 501 ttatttctatgtacattcatttttaaaataaatgagaaaaatatatacag 550
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 750
Length adjustment: 9
Effective length of query: 335
Effective length of database: 741
Effective search space: 248235
Effective search space used: 248235
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
