Query= MSMg01no279_c17.b1 MSMg01no279_c17.b1 CHROMAT_FILE:
MSMg01no279_c17.b1 PHD_FILE: MSMg01no279_c17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:19:42 2005
(697 letters)
>mm_chr6_39885974_39887070
Length = 1097
Score = 1077 bits (557), Expect = 0.0
Identities = 571/576 (99%)
Strand = Plus / Minus
Query: 122 aaaactcgagacatatggagaaatccacccgaactgtaggtcatgtcatgccatcccgag 181
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
Sbjct: 1097 aaaactcgagacatatggagaaatccacccgaactgcaggtcatgtcatgccatcccgcg 1038
Query: 182 ggctgagctcctagtgtaaggaagcaggagaaagccagtggcaggcttcatctgtctgtt 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1037 ggctgagctcctagtgtaaggaagcaggagaaagccagtggcaggcttcatctgtctgtt 978
Query: 242 tgctaagcgcagctgcaacacatccagctgcctcaagttctcacctctcaggcttctcca 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 977 tgctaagcgcagctgcaacacatccagctgcctcaagttctcacctctcaggcttctcca 918
Query: 302 tcatggccgactttaccctcttagccatttggtaaggtgtttattacagcaacaagagta 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 917 tcatggccgactttaccctcttagccatttggtaaggtgtttattacagcaacaagagta 858
Query: 362 ataatgaggatgagtatttattgggggcatcacagggacaggcttgtcactgagtgctga 421
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 857 ataatgaggatgagtatttattgggggcatcacagagacaggcttgtcactgagtgctga 798
Query: 422 gactgagccccgatactatcaagttcctattctataagaaatgggatggcaccaggggaa 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 gactgagccccgatactatcaagttcctattctataagaaatgggatggcaccaggggaa 738
Query: 482 gagggtcaataaccaaaaagtttacatcagatgatgtataatgagaaaattagagggcca 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 gagggtcaataaccaaaaagtttacatcagatgatgtataatgagaaaattagagggcca 678
Query: 542 acaatcaaaaggtaaaattagaccatgattatgcactctgtttgtacttaaaggtcattg 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 acaatcaaaaggtaaaattagaccatgattatgcactctgtttgtacttaaaggtcattg 618
Query: 602 tgcgtttaagtttctcctaattaaggtaagaagctggaaggcaaagtgatggggcaattt 661
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 617 tgcgtttaagtttctcctaattaaggtaagaagctggaaggcagagtgatggggcaattt 558
Query: 662 anaaactgatgttcaagctatgcttatagagtatcc 697
| ||||||||||||||||||||||||||||||||||
Sbjct: 557 aaaaactgatgttcaagctatgcttatagagtatcc 522
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 697
Length of database: 1097
Length adjustment: 10
Effective length of query: 687
Effective length of database: 1087
Effective search space: 746769
Effective search space used: 746769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no279_c17.g1 MSMg01no279_c17.g1 CHROMAT_FILE:
MSMg01no279_c17.g1 PHD_FILE: MSMg01no279_c17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:19:42 2005
(268 letters)
>mm_chr6_39739957_39740619
Length = 663
Score = 226 bits (117), Expect = 8e-64
Identities = 134/141 (95%), Gaps = 5/141 (3%)
Strand = Plus / Plus
Query: 1 gagatgacactgaagagtcctccgacattcattcgtattacccagtgttggtaaatccta 60
|||||||||||||||||||||||||||||| | ||||||||||||| |||||||||||
Sbjct: 201 gagatgacactgaagagtcctccgacattc--t--tattacccagtgtcggtaaatccta 256
Query: 61 gtgtcaatttgaattaattatcatttgtctgtttcctcctgattcctttatttcttgcgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 gtgtcaatttgaattaattatcatttgtctgtttcctcctgattcctttatttcttgcgt 316
Query: 121 tttttttttcttttttctttt 141
||||||| | |||||||||||
Sbjct: 317 tttttttct-ttttttctttt 336
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 268
Length of database: 663
Length adjustment: 9
Effective length of query: 259
Effective length of database: 654
Effective search space: 169386
Effective search space used: 169386
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
